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Report for CCDS87396.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
87396.1 Public Homo sapiens 6 OARD1 24 110 108 CCDS HistoryNCBI Gene:221443Re-query CCDS DB by CCDS ID:87396.1Re-query CCDS DB by GeneID:221443See the combined annotation on chromosome 6 in Sequence Viewer

Public since: CCDS release 22, NCBI annotation release 109, Ensembl annotation release 92

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 87396.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000482515.5 ENSP00000418098.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000482515.5Link to Ensembl Protein Viewer:ENSP00000418098.1Re-query CCDS DB by Nucleotide ID:ENST00000482515Re-query CCDS DB by Protein ID:ENSP00000418098
Original member Current member EBI ENST00000464633.5 ENSP00000419875.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000464633.5Link to Ensembl Protein Viewer:ENSP00000419875.1Re-query CCDS DB by Nucleotide ID:ENST00000464633Re-query CCDS DB by Protein ID:ENSP00000419875
Original member Current member NCBI NM_001329694.2 NP_001316623.1 Accepted alive Link to Nucleotide Sequence:NM_001329694.2Link to Protein Sequence:NP_001316623.1Re-query CCDS DB by Nucleotide ID:NM_001329694Re-query CCDS DB by Protein ID:NP_001316623Link to BLAST:NP_001316623.1
Original member Current member NCBI NM_001329695.1 NP_001316624.1 Accepted alive Link to Nucleotide Sequence:NM_001329695.1Link to Protein Sequence:NP_001316624.1Re-query CCDS DB by Nucleotide ID:NM_001329695Re-query CCDS DB by Protein ID:NP_001316624Link to BLAST:NP_001316624.1
Original member Current member NCBI NM_001329696.2 NP_001316625.1 Accepted alive Link to Nucleotide Sequence:NM_001329696.2Link to Protein Sequence:NP_001316625.1Re-query CCDS DB by Nucleotide ID:NM_001329696Re-query CCDS DB by Protein ID:NP_001316625Link to BLAST:NP_001316625.1

Chromosomal Locations for CCDS 87396.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 6 (NC_000006.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6See the combined annotation on chromosome 6 in Sequence Viewer

Chromosome Start Stop Links
6 41067388 41067437 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 41071132 41071276 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 41071596 41071634 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (234 nt):
ATGGCCAGCAGCCTTAATGAAGATCCAGAAGGAAGCAGAATCACTTATGTGAAAGGAGACCTTTTTGCAT
GCCCGAAAACAGACTCTTTAGCCCACTGTATCAGTGAGGATTGTCGCATGGGCGCTGGGATAGCTGTCCT
CTTTAAGAAGAAATTTGGAGGGGTGCAAGAACTTTTAAATCAACGATTGGATGTGGTCTTGATCGTCTGC
AATGGGAAAATGTATCTGCGATGA

Translation (77 aa):
MASSLNEDPEGSRITYVKGDLFACPKTDSLAHCISEDCRMGAGIAVLFKKKFGGVQELLNQRLDVVLIVC
NGKMYLR


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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