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Report for CCDS47582.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
47582.1 Public Homo sapiens 7 NACAD 24 110 108 CCDS HistoryNCBI Gene:23148Re-query CCDS DB by CCDS ID:47582.1Re-query CCDS DB by GeneID:23148See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 47582.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000490531.3 ENSP00000420477.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000490531.3Link to Ensembl Protein Viewer:ENSP00000420477.2Re-query CCDS DB by Nucleotide ID:ENST00000490531Re-query CCDS DB by Protein ID:ENSP00000420477
Original member Current member NCBI NM_001146334.2 NP_001139806.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001146334.2Link to Protein Sequence:NP_001139806.1Re-query CCDS DB by Nucleotide ID:NM_001146334Re-query CCDS DB by Protein ID:NP_001139806Link to BLAST:NP_001139806.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001139806.1 1562 O15069 1562 100% 0 0

Chromosomal Locations for CCDS 47582.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 7 (NC_000007.14)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 45080509 45080523 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 45080640 45080762 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 45080876 45081022 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 45081117 45081263 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 45081601 45081672 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 45081755 45081867 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 45082108 45086112 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 45088828 45088894 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (4689 nt):
ATGCCTGGGGAGGCTGCCCGCGCCGAGCTGCTGCTGCCCGAGGCGGACCGACCCGGGCCCCGCACAGATC
TGTCCTGCGATGCGGCCGCTGCCACCACCATCCTGGGAGGGGACCGGCGGGAGCCCTGTGCTCTGACCCC
AGGGCCCAGCCACCTGGCCCTCACGTTCCTGCCCAGCAAGCCGGGTGCCCGGCCCCAGCCCGAGGGAGCC
AGCTGGGATGCAGGGCCTGGTGGGGCACCCTCGGCCTGGGCGGACCCAGGGGAGGGCGGCCCAAGCCCCA
TGCTCCTCCCTGAGGGCCTGTCTTCCCAGGCTCTGTCCACGGAGGCTCCTCTCCCGGCCACCCTGGAGCC
CCGGATTGTGATGGGAGAGGAGACGTGCCAGGCCCTCCTGTCACCCAGAGCTGCCCGGACAGCGCTCAGG
GACCAGGAGGGTGGGCACGCAAGCCCAGACCCACCCCCCGAGCTGTGTTCTCAGGGTGATCTTTCTGTGC
CTTCCCCTCCCCCAGACCCTGATTCCTTCTTCACGCCTCCCTCCACCCCCACCAAGACCACCTATGCCCT
GCTTCCTGCCTGTGGGCCCCACGGGGACGCCAGGGACTCAGAGGCTGAGCTGCGGGATGAGCTGCTGGAC
TCGCCCCCCGCCTCACCCTCGGGCTCCTACATTACGGCCGATGGGGACAGCTGGGCCTCTTCACCCTCCT
GTTCCCTCAGCCTGCTGGCTCCGGCTGAAGGGCTGGACTTCCCCTCAGGCTGGGGCCTGTCCCCGCAGGG
GTCCATGGTGGATGAACGAGAGCTGCACCCAGCAGGGACCCCAGAGCCCCCGTCCTCTGAGTCCAGCCTC
TCTGCAGACAGCAGCTCCTCCTGGGGCCAGGAGGGCCACTTCTTCGACCTGGACTTCCTGGCCAATGACC
CAATGATCCCCGCAGCCCTCCTACCCTTCCAGGGCAGCCTCATCTTTCAGGTGGAGGCAGTGGAGGTGAC
ACCGCTATCCCCAGAGGAAGAAGAAGAGGAGGCTGTGGCGGATCCCGACCCAGGTGGGGACCTGGCTGGG
GAGGGTGAGGAGGACAGCACGTCTGCCTCCTTCCTGCAGTCACTGTCTGACCTGTCCATCACGGAGGGCA
TGGACGAGGCTTTTGCCTTCCGGGACGACACCTCTGCAGCCTCCTCTGATTCAGACTCAGCCTCCTACGC
AGAGGCAGATGATGAGAGGCTGTACAGCGGGGAGCCCCATGCCCAGGCCACTTTGCTCCAGGACAGTGTC
CAGAAGACAGAGGAGGAGAGCGGAGGTGGGGCCAAGGGGCTGCAGGCTCAGGATGGGACTGTGTCCTGGG
CCGTGGAGGCTGCTCCTCAGACCTCAGACAGAGGGGCCTATCTGTCCCAGAGACAGGAATTGATCTCAGA
AGTAACAGAAGAGGGCCTTGCTTTAGGCCAGGAGTCCACTGCCACTGTGACCCCTCACACTCTGCAGGTA
GCCCCAGGCCTCCAGGTGGAGGTGGCTACCAGAGTGACCCCACAGGCTGGGGAGGAAGAAACAGACTCCA
CCGCTGGACAAGAATCTGCTGCCATGGCAATGCCTCAGCCCTCCCAGGAGGGCATCAGCGAGATCTTAGG
CCAAGAGTCTGTCACTGCAGAAAAACTTCCAACTCCACAGGAAGAAACAAGCCTCACATTGTGTCCAGAC
TCTCCTCAGAACTTGAAGGAAGAAGGAGGGCTGGACCTCCCCTCTGGCAGAAAGCCTGTAGCTGCAGCCA
CGATTGTCCCCAGGCAGGCTAAAGAGGACCTCACCTTACCCCAGGACTCCGCTATGACACCGCCTCTGCC
CCTACAAGACACAGATCTCTCATCAGCCCCAAAGCCTGTGGCTGCAGCCACGATTGTGTCCCAGCAGGCT
GAAGAGGGCCTCACCTTACCCCAGGACTCCGTTATGACACCGCCTCTGCCCCTACAAGACACAGAACTCT
CGTCAGCCCCAAAGCCTGTGGCTGCAGCCACGCTTGTGTCCCAGCAGGCTGAAGAGGGCCTCACCTTACC
CCAGGACTCCGCTATGACACCGCCTCTGCCCCTACAAGACACAGATCTCTCGTCAGCCCCAAAGCCTGTG
GCTGCAGCCACGCTTGTGTCCCAGCAGGCTGAAGAGGGCCTCACCTTACCCCAGGACTCCGCTATGACAC
CGCCTCTGCCCCTACAAGACACAGATCTCTCGTCAGCCCCAAAGCCTGTGGCTGCAGCCACGCTTGTGTC
CCAGCAGGCTGAAGAGGGCCTCACCTTACCCCAGGACTCCGCTATGACACCGCCTCTGCCCCTACAAGAC
ACAGATCTCTCGTCAGCCCCAAAGCCTGTGGCTGCAGCCACGATTGTGTCCCAGCAGGCTGAAGAGGGCC
TCACCTTACCCCAGGACTCCGCTATGACACCGCCTCTGCCCCTACAAGACACAGATCTCTCGTCAGCCCC
AAAGCCTGTGGCTGCAGCCACGATTGTGTCCCAGCAGGCTGAAGAGGGCCTCACCTTACCCCAGGACTCC
GCTATGACACCGCCTCTGCCCCTACAAGACACAGATCTCTCGTCAGCCCCAAAGCCTGTGGCTGCAGCCA
CGCCTGTGTCCCAGCAGGCTGAAGAGGGCCTCACCTTACCCCAGGACTCCGCTATGACACCGCCTCTGCC
CCTACAAGACACAGATCTCTCGTCAGCCCCAAAGCCTGTGGCTGCAGCCACGCCTGTGTCCCAGCAGGCT
GAAGAGGGCCTCACCTTACCCCAGGACTCCGCTATGACAGCACCTCTGCCTCTGCAAGACACAGGCCCCA
CCTCAGGTCCAGAGCCTCTGGCTGTGGCCACCCCTCAAACCTTGCAGGCAGAAGCAGGCTGTGCCCCAGG
GACAGAGCCTGTGGCCACCATGGCTCAGCAGGAAGTAGGTGAGGCCTTAGGCCCCAGGCCAGCACCTGAG
GAGAAGAATGCAGCCCTCCCTACAGTCCCGGAGCCTGCAGCCTTGGACCAGGTCCAACAGGATGACCCAC
AGCCAGCTGCAGAAGCTGGGACACCTTGGGCCGCACAGGAAGATGCGGATTCCACTTTGGGCATGGAGGC
CCTCAGTCTCCCTGAGCCGGCCTCTGGTGCTGGGGAGGAAATAGCAGAAGCCCTTTCTAGGCCTGGACGG
GAAGCATGTCTGGAAGCGCGAGCGCACACAGGTGATGGGGCTAAGCCTGACTCACCCCAAAAGGAGACCC
TGGAGGTTGAGAACCAGCAGGAAGGAGGCCTGAAGCCACTGGCACAGGAACATGGACCCAGGTCAGCACT
TGGAGGTGCAAGGGAGGTCCCCGATGCGCCTCCTGCTGCCTGCCCTGAGGTCAGCCAGGCCCGGCTCCTG
AGCCCAGCCAGGGAGGAAAGAGGCCTGAGTGGCAAGTCCACCCCGGAGCCCACGCTTCCCTCAGCTGTGG
CCACAGAGGCCAGTCTGGACTCCTGCCCAGAGTCTTCAGTAGGGGCTGTGTCCAGTCTGGACAGAGGCTG
CCCTGACGCGCCTGCCCCCACGTCTGCACCAACCTCCCAGCAGCCGGAGCCTGTACTGGGTCTGGGCAGT
GTTGAGCAACCCCACGAAGTACCCAGTGTCCTTGGCACCCCCTTGCTGCAGCCCCCAGAAAACCTTGCCA
AGGGTCAGCCCAGCACGCCCGTGGACAGGCCCCTGGGCCCTGACCCTTCTGCTCCTGGTACCCTTGCTGG
GGCAGCCCTACCCCCACTGGAGCCCCCAGCCCCCTGCCTGTGCCAGGACCCCCAGGAAGACTCTGTGGAA
GACGAGGAGCCCCCAGGCTCTCTGGGCCTCCCACCGCCCCAGGCAGGAGTCCAGCCTGCCGCTGCTGCTG
TCTCAGGAACCACACAGCCTCTGGGGACTGGGCCGCGAGTCAGCCTCTCGCCTCACTCCCCACTCCTCAG
CCCCAAGGTGGCCTCCATGGATGCCAAAGACCTGGCCTTGCAGATCTTGCCGCCTTGCCAAGTGCCTCCT
CCCTCTGGGCCCCAGAGCCCAGCTGGCCCTCAAGGGCTCTCAGCCCCCGAGCAGCAAGAGGATGAGGACA
GCCTGGAGGAAGACTCGCCTCGGGCCCTGGGCTCGGGCCAGCATTCGGATAGCCACGGGGAGTCATCAGC
CGAGCTGGACGAGCAGGACATCTTGGCTCCTCAGACCGTGCAGTGTCCAGCCCAGGCCCCAGCAGGCGGC
AGTGAGGAGACCATCGCCAAAGCCAAGCAGAGTCGCAGTGAGAAGAAGGCCCGAAAGGCAATGTCAAAGC
TGGGCTTGCGGCAGATTCAGGGAGTCACCAGGATCACCATCCAGAAGTCCAAGAACATCCTCTTTGTCAT
CGCCAAGCCTGATGTCTTCAAGAGCCCAGCCTCAGACACTTATGTGGTCTTTGGCGAGGCCAAGATTGAG
GACCTGTCCCAGCAAGTGCACAAAGCCGCAGCTGAGAAGTTTAAGGTGCCCTCAGAGCCCTCAGCCTTGG
TCCCTGAGTCAGCACCCAGGCCCCGGGTGAGGCTGGAGTGCAAGGAAGAGGAAGAGGAGGAGGAGGAAGA
GGTGGACGAGGCGGGGCTGGAACTGCGTGACATTGAGCTGGTGATGGCGCAGGCCAATGTGTCCAGGGCC
AAGGCCGTGCGGGCTCTGAGAGACAACCACAGTGACATCGTCAACGCCATCATGGAACTGACCATGTAG

Translation (1562 aa):
MPGEAARAELLLPEADRPGPRTDLSCDAAAATTILGGDRREPCALTPGPSHLALTFLPSKPGARPQPEGA
SWDAGPGGAPSAWADPGEGGPSPMLLPEGLSSQALSTEAPLPATLEPRIVMGEETCQALLSPRAARTALR
DQEGGHASPDPPPELCSQGDLSVPSPPPDPDSFFTPPSTPTKTTYALLPACGPHGDARDSEAELRDELLD
SPPASPSGSYITADGDSWASSPSCSLSLLAPAEGLDFPSGWGLSPQGSMVDERELHPAGTPEPPSSESSL
SADSSSSWGQEGHFFDLDFLANDPMIPAALLPFQGSLIFQVEAVEVTPLSPEEEEEEAVADPDPGGDLAG
EGEEDSTSASFLQSLSDLSITEGMDEAFAFRDDTSAASSDSDSASYAEADDERLYSGEPHAQATLLQDSV
QKTEEESGGGAKGLQAQDGTVSWAVEAAPQTSDRGAYLSQRQELISEVTEEGLALGQESTATVTPHTLQV
APGLQVEVATRVTPQAGEEETDSTAGQESAAMAMPQPSQEGISEILGQESVTAEKLPTPQEETSLTLCPD
SPQNLKEEGGLDLPSGRKPVAAATIVPRQAKEDLTLPQDSAMTPPLPLQDTDLSSAPKPVAAATIVSQQA
EEGLTLPQDSVMTPPLPLQDTELSSAPKPVAAATLVSQQAEEGLTLPQDSAMTPPLPLQDTDLSSAPKPV
AAATLVSQQAEEGLTLPQDSAMTPPLPLQDTDLSSAPKPVAAATLVSQQAEEGLTLPQDSAMTPPLPLQD
TDLSSAPKPVAAATIVSQQAEEGLTLPQDSAMTPPLPLQDTDLSSAPKPVAAATIVSQQAEEGLTLPQDS
AMTPPLPLQDTDLSSAPKPVAAATPVSQQAEEGLTLPQDSAMTPPLPLQDTDLSSAPKPVAAATPVSQQA
EEGLTLPQDSAMTAPLPLQDTGPTSGPEPLAVATPQTLQAEAGCAPGTEPVATMAQQEVGEALGPRPAPE
EKNAALPTVPEPAALDQVQQDDPQPAAEAGTPWAAQEDADSTLGMEALSLPEPASGAGEEIAEALSRPGR
EACLEARAHTGDGAKPDSPQKETLEVENQQEGGLKPLAQEHGPRSALGGAREVPDAPPAACPEVSQARLL
SPAREERGLSGKSTPEPTLPSAVATEASLDSCPESSVGAVSSLDRGCPDAPAPTSAPTSQQPEPVLGLGS
VEQPHEVPSVLGTPLLQPPENLAKGQPSTPVDRPLGPDPSAPGTLAGAALPPLEPPAPCLCQDPQEDSVE
DEEPPGSLGLPPPQAGVQPAAAAVSGTTQPLGTGPRVSLSPHSPLLSPKVASMDAKDLALQILPPCQVPP
PSGPQSPAGPQGLSAPEQQEDEDSLEEDSPRALGSGQHSDSHGESSAELDEQDILAPQTVQCPAQAPAGG
SEETIAKAKQSRSEKKARKAMSKLGLRQIQGVTRITIQKSKNILFVIAKPDVFKSPASDTYVVFGEAKIE
DLSQQVHKAAAEKFKVPSEPSALVPESAPRPRVRLECKEEEEEEEEEVDEAGLELRDIELVMAQANVSRA
KAVRALRDNHSDIVNAIMELTM


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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