NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq


Report for CCDS64660.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
64660.1 Public Homo sapiens 7 ZNF138 24 110 108 CCDS HistoryNCBI Gene:7697Re-query CCDS DB by CCDS ID:64660.1Re-query CCDS DB by GeneID:7697See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 14, NCBI annotation release 105, Ensembl annotation release 73

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 64660.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000307355.12 ENSP00000303533.7 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000307355.12Link to Ensembl Protein Viewer:ENSP00000303533.7Re-query CCDS DB by Nucleotide ID:ENST00000307355Re-query CCDS DB by Protein ID:ENSP00000303533
Original member Current member NCBI NM_001271639.2 NP_001258568.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001271639.2Link to Protein Sequence:NP_001258568.2Re-query CCDS DB by Nucleotide ID:NM_001271639Re-query CCDS DB by Protein ID:NP_001258568Link to BLAST:NP_001258568.2

Chromosomal Locations for CCDS 64660.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 7 (NC_000007.14)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 64794569 64794571 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 64814918 64815044 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 64815576 64815653 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 64831451 64832202 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (960 nt):
ATGGGACCACTGACATTTATGGATGTGGCCATAGAGTTCTCTTTGGAGGAGTGGCAGTGCCTGGACACTG
CACAGCGGAATGTATATAGGCATGTGATGTTAGAGAACTACAGAAACCTGGTTTTCTTGGACCTGATTAC
CTGTCTGGAACAAGGAAAAGAGCCCTGGAATATGAAGAGACATGAGATGGTGGTAGCCAAACATTCAGCT
CTGTGTTCTCGTTTTGCCCAAGACCTTTGGCTAGAGCAGAACATAAAAGATTCTTTCCAAAAAGTGACAC
TGAGCAGATATGGAAAATATGGACATAAGAATTTACAGTTAAGAAAAGGCTGTAAAAGTGTGGATGAGTG
TAAGGGACACCAAGGAGGTTTTAATGGACTTAACCAATGTTTGAAAATTACCACAAGCAAAATATTTCAA
TGTAATAAATATGTAAAAGTCATGCATAAATTTTCAAATTCAAATAGACACAAGATAAGACATACTGAAA
ATAAACATTTCAGATGTAAAGAATGTGACAAATCACTTTGCATGCTTTCACGCCTAACTCAACATAAAAA
AATTCATACTAGAGAGAATTTCTACAAATGTGAAGAGTGTGGAAAAACCTTTAACTGGTCCACAAACCTT
TCTAAACCTAAGAAAATTCATACTGGAGAAAAACCCTACAAATGTGAAGTATGTGGAAAAGCCTTTCACC
AATCCTCAATCCTTACTAAACATAAGATAATTCGTACTGGAGAAAAACCCTATAAATGTGCACACTGTGG
CAAAGCCTTTAAACAGTCCTCACACCTTACTAGACATAAGATAATTCATACTGAAGAGAAACCCTACAAA
TGTGAACAATGTGGCAAGGTCTTTAAGCAGTCCCCAACCCTTACTAAACATCAGATAATTTATACTGGAG
AGGAACCATACAAATGTGAGGAATGTGGCAAAGCTTTTAACCTATCTTAA

Translation (319 aa):
MGPLTFMDVAIEFSLEEWQCLDTAQRNVYRHVMLENYRNLVFLDLITCLEQGKEPWNMKRHEMVVAKHSA
LCSRFAQDLWLEQNIKDSFQKVTLSRYGKYGHKNLQLRKGCKSVDECKGHQGGFNGLNQCLKITTSKIFQ
CNKYVKVMHKFSNSNRHKIRHTENKHFRCKECDKSLCMLSRLTQHKKIHTRENFYKCEECGKTFNWSTNL
SKPKKIHTGEKPYKCEVCGKAFHQSSILTKHKIIRTGEKPYKCAHCGKAFKQSSHLTRHKIIHTEEKPYK
CEQCGKVFKQSPTLTKHQIIYTGEEPYKCEECGKAFNLS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH