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Report for CCDS5696.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
5696.1 Public Homo sapiens 7 NYAP1 24 110 108 CCDS HistoryNCBI Gene:222950Re-query CCDS DB by CCDS ID:5696.1Re-query CCDS DB by GeneID:222950See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 5696.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000300179.7 ENSP00000300179.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000300179.7Link to Ensembl Protein Viewer:ENSP00000300179.2Re-query CCDS DB by Nucleotide ID:ENST00000300179Re-query CCDS DB by Protein ID:ENSP00000300179
Original member Current member NCBI NM_173564.4 NP_775835.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_173564.4Link to Protein Sequence:NP_775835.2Re-query CCDS DB by Nucleotide ID:NM_173564Re-query CCDS DB by Protein ID:NP_775835Link to BLAST:NP_775835.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_775835.2 841 Q6ZVC0-1 841 100% 0 0

Chromosomal Locations for CCDS 5696.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 7 (NC_000007.14)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 100485312 100485379 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 100486821 100487182 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 100488152 100489666 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 100490517 100490729 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 100490986 100491095 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 100493646 100493903 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2526 nt):
ATGAACCTCCTCTACCGAAAAACCAAGCTGGAGTGGAGGCAGCACAAGGAAGAGGAGGCCAAGAGGAGCT
CCAGTAAGGAGGTGGCCCCCGCTGGCTCGGCTGGGCCCGCGGCCGGCCAGGGGCCTGGGGTCCGCGTGCG
GGACATCGCCTCGCTGCGGCGCTCCCTCAGGATGGGTTTCATGACGATGCCCGCCTCCCAGGAGCACACC
CCGCACCCCTGCCGCAGCGCCATGGCCCCACGCTCCCTCTCCTGCCACTCGGTGGGCAGCATGGACAGTG
TCGGGGGTGGCCCTGGCGGGGCCAGTGGGGGCCTCACAGAGGACAGCAGCACCCGAAGACCCCCTGCCAA
GCCCCGGAGACACCCCAGCACCAAGCTCAGCATGGTGGGGCCTGGGTCTGGGGCAGAGACGCCCCCCAGC
AAGAAAGCAGGCTCACAGAAGCCAACCCCAGAGGGCCGAGAGTCCAGCCGGAAGGTTCCTCCGCAGAAGC
CCAGGCGAAGCCCTAACACCCAGCTCTCTGTCTCCTTCGATGAGTCCTGCCCCCCAGGCCCCTCTCCTCG
AGGGGGGAACCTGCCTCTTCAGCGCCTCACTAGGGGGTCCCGAGTAGCTGGGGACCCTGATGTGGGTGCC
CAGGAAGAGCCTGTGTACATTGAGATGGTGGGGGACGTCTTTAGGGGAGGAGGACGAAGTGGAGGAGGCC
TGGCTGGGCCCCCTCTTGGGGGTGGGGGCCCGACCCCTCCAGCGGGCGCCGACTCGGACTCTGAAGAGAG
TGAGGCCATCTATGAAGAGATGAAGTACCCGCTGCCGGAAGAGGCTGGGGAAGGCCGGGCCAATGGCCCT
CCACCATTGACGGCAACATCCCCGCCACAACAGCCTCACGCCCTTCCGCCCCATGCCCACCGCCGCCCAG
CTTCAGCCCTCCCGAGCCGGAGGGACGGGACGCCCACCAAGACCACTCCTTGTGAAATCCCCCCGCCCTT
CCCCAACCTCCTTCAGCACCGGCCTCCACTCCTGGCCTTCCCCCAAGCCAAGTCTGCTTCCCGAACCCCT
GGCGATGGGGTCTCAAGGCTACCTGTCCTCTGCCACTCCAAGGAGCCAGCCGGCTCCACCCCAGCTCCCC
AAGTGCCTGCACGGGAGCGGGAGACGCCTCCCCCACCGCCTCCACCTCCTGCTGCCAACCTGCTGCTGCT
GGGACCATCGGGCCGGGCCCGGAGCCACTCGACACCGTTGCCACCCCAGGGCTCTGGCCAGCCCCGGGGG
GAGCGGGAGCTCCCCAACTCCCACAGCATGATCTGCCCTAAGGCGGCGGGGGCGCCGGCAGCCCCCCCTG
CCCCGGCCGCCTTGCTCCCCGGCCCCCCCAAGGACAAGGCCGTGTCTTACACCATGGTGTACTCGGCGGT
CAAGGTGACCACGCACTCTGTCCTGCCAGCTGGTCCACCCCTGGGTGCTGGGGAGCCAAAGACGGAGAAG
GAGATCTCGGTCCTCCATGGGATGCTGTGTACCAGCTCAAGGCCCCCTGTGCCAGGGAAGACCAGCCCCC
ACGGTGGGGCCATGGGCGCAGCAGCTGGGGTCCTCCACCACCGCGGCTGCCTGGCCTCCCCCCACAGCCT
TCCGGACCCAACTGTAGGCCCCCTGACCCCGCTGTGGACCTACCCAGCCACAGCAGCTGGGCTCAAGAGA
CCCCCTGCCTATGAGAGCCTCAAGGCTGGGGGGGTGCTGAATAAGGGCTGTGGTGTGGGGGCCCCATCCC
CCATGGTCAAGATCCAGCTGCAGGAGCAAGGGACCGATGGGGGTGCTTTTGCCAGCATCTCCTGTGCCCA
CGTCATCGCCAGCGCAGGGACACCAGAGGAGGAAGAAGAGGAGGTGGGCGCCGCGACATTTGGGGCAGGC
TGGGCCCTGCAGAGGAAGGTCCTCTATGGAGGGAGAAAAGCAAAGGAGTTGGACAAGGTCGAGGACGGTG
CCCGGGCCTGGAATGGCAGTGCCGAGGGTCCAGGCAAGGTGGAGCGTGAGGACAGGGGCCCTGGGACATC
GGGGATCCCAGTGAGAAGCCAGGGGGCAGAGGGACTGCTGGCCAGGATCCACCATGGAGACCGAGGAGGG
AGCCGCACCGCGCTGCCCATTCCCTGCCAGACCTTCCCCGCCTGCCACCGCAATGGAGACTTCACGGGAG
GCTACCGCCTGGGGCGCTCCGCCTCCACCTCCGGAGTCCGGCAGGTCGTGCTCCACACACCCCGGCCCTG
CAGCCAGCCCAGGGATGCCCTGAGCCAGCCCCACCCCGCGCTGCCGCTGCCTCTGCCCCTGCCGCCCCAG
CCGGCCCGCGAGCGTGACGGGAAGCTGCTGGAGGTGATCGAGCGCAAGCGCTGCGTGTGCAAGGAGATCA
AGGCGCGCCACCGCCCGGACCGAGGCCTCTGCAAGCAGGAGAGCATGCCCATCCTCCCCAGCTGGCGGCG
GGGACCCGAGCCCCGCAAGTCCGGCACCCCGCCCTGCCGCCGGCAGCACACGGTCCTCTGGGACACCGCC
ATCTGA

Translation (841 aa):
MNLLYRKTKLEWRQHKEEEAKRSSSKEVAPAGSAGPAAGQGPGVRVRDIASLRRSLRMGFMTMPASQEHT
PHPCRSAMAPRSLSCHSVGSMDSVGGGPGGASGGLTEDSSTRRPPAKPRRHPSTKLSMVGPGSGAETPPS
KKAGSQKPTPEGRESSRKVPPQKPRRSPNTQLSVSFDESCPPGPSPRGGNLPLQRLTRGSRVAGDPDVGA
QEEPVYIEMVGDVFRGGGRSGGGLAGPPLGGGGPTPPAGADSDSEESEAIYEEMKYPLPEEAGEGRANGP
PPLTATSPPQQPHALPPHAHRRPASALPSRRDGTPTKTTPCEIPPPFPNLLQHRPPLLAFPQAKSASRTP
GDGVSRLPVLCHSKEPAGSTPAPQVPARERETPPPPPPPPAANLLLLGPSGRARSHSTPLPPQGSGQPRG
ERELPNSHSMICPKAAGAPAAPPAPAALLPGPPKDKAVSYTMVYSAVKVTTHSVLPAGPPLGAGEPKTEK
EISVLHGMLCTSSRPPVPGKTSPHGGAMGAAAGVLHHRGCLASPHSLPDPTVGPLTPLWTYPATAAGLKR
PPAYESLKAGGVLNKGCGVGAPSPMVKIQLQEQGTDGGAFASISCAHVIASAGTPEEEEEEVGAATFGAG
WALQRKVLYGGRKAKELDKVEDGARAWNGSAEGPGKVEREDRGPGTSGIPVRSQGAEGLLARIHHGDRGG
SRTALPIPCQTFPACHRNGDFTGGYRLGRSASTSGVRQVVLHTPRPCSQPRDALSQPHPALPLPLPLPPQ
PARERDGKLLEVIERKRCVCKEIKARHRPDRGLCKQESMPILPSWRRGPEPRKSGTPPCRRQHTVLWDTA
I


Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
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