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Report for CCDS6888.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
6888.1 Public Homo sapiens 9 EEIG1 24 110 108 CCDS HistoryNCBI Gene:399665Re-query CCDS DB by CCDS ID:6888.1Re-query CCDS DB by GeneID:399665See the combined annotation on chromosome 9 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 6888.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000373084.8 ENSP00000362176.4 Accepted alive Link to Ensembl Transcript Viewer:ENST00000373084.8Link to Ensembl Protein Viewer:ENSP00000362176.4Re-query CCDS DB by Nucleotide ID:ENST00000373084Re-query CCDS DB by Protein ID:ENSP00000362176
Original member Current member NCBI NM_203305.3 NP_976050.1 Accepted alive Link to Nucleotide Sequence:NM_203305.3Link to Protein Sequence:NP_976050.1Re-query CCDS DB by Nucleotide ID:NM_203305Re-query CCDS DB by Protein ID:NP_976050Link to BLAST:NP_976050.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_976050.1 242 Q5T9C2-3 242 100% 0 0

Chromosomal Locations for CCDS 6888.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 9 (NC_000009.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9See the combined annotation on chromosome 9 in Sequence Viewer

Chromosome Start Stop Links
9 127943192 127943237 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 127944615 127944684 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 127944777 127944898 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 127945367 127945562 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 127945649 127945753 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 127948071 127948225 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 127948368 127948402 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (729 nt):
ATGTTCCTGCTCTCTGGAGATCCCTGCTTCAAGACGCCACCATCGACTGCCAAGTCCATCTCCATCCCAG
GCCAGGATTCCTCCCTGCAGCTGACGTGTAAGGGTGGTGGGACCAGCAGTGGGGGCAGCAGCACCAACTC
CCTGACTGGGTCCCGGCCCCCCAAGGCTCGGCCCACTATTCTCAGCTCAGGGCTGCCAGAGGAACCCGAC
CAGAACCTGTCCAGCCCTGAGGAGGTGTTCCACTCTGGCCACTCCCGCAACTCCAGCTATGCCAGCCAGC
AGTCCAAGATCTCCGGCTACAGCACAGAGCACTCGCGCTCCTCCAGCCTCTCAGACCTGACGCACCGCCG
CAACACGTCCACCAGCAGCAGCGCCTCTGGGGGCCTTGGCATGACCGTGGAGGGCCCTGAGGGCAGTGAG
CGGGAGCACCGGCCCCCGGAGAAGCCGCCGCGGCCACCCCGGCCCCTGCATCTGTCCGATCGCTCTTTCA
GGCGGAAGAAGGACTCGGTGGAGAGCCACCCGACCTGGGTGGACGACACGCGGATCGATGCGGATGCCAT
CGTGGAGAAGATCGTGCAGAGCCAGGATTTCACAGATGGCAGCAACACCGAGGACAGCAACCTCCGGCTG
TTCGTGAGCCGCGATGGCTCTGCCACGCTGAGCGGCATCCAGCTTGCCACCAGGGTCTCTTCTGGGGTCT
ACGAGCCAGTTGTGATTGAAAGCCATTGA

Translation (242 aa):
MFLLSGDPCFKTPPSTAKSISIPGQDSSLQLTCKGGGTSSGGSSTNSLTGSRPPKARPTILSSGLPEEPD
QNLSSPEEVFHSGHSRNSSYASQQSKISGYSTEHSRSSSLSDLTHRRNTSTSSSASGGLGMTVEGPEGSE
REHRPPEKPPRPPRPLHLSDRSFRRKKDSVESHPTWVDDTRIDADAIVEKIVQSQDFTDGSNTEDSNLRL
FVSRDGSATLSGIQLATRVSSGVYEPVVIESH


Links Key
 Links to:   History report
  BLAST report
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  Nucleotide report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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