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Report for CCDS94607.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
94607.1 Public Homo sapiens X MAGIX 24 110 108 CCDS HistoryNCBI Gene:79917Re-query CCDS DB by CCDS ID:94607.1Re-query CCDS DB by GeneID:79917See the combined annotation on chromosome X in Sequence Viewer

Public since: CCDS release 24, NCBI annotation release 110, Ensembl annotation release 108

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 94607.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000616266.4 ENSP00000481198.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000616266.4Link to Ensembl Protein Viewer:ENSP00000481198.1Re-query CCDS DB by Nucleotide ID:ENST00000616266Re-query CCDS DB by Protein ID:ENSP00000481198
Original member Current member NCBI NM_001395401.1 NP_001382330.1 Accepted alive Link to Nucleotide Sequence:NM_001395401.1Link to Protein Sequence:NP_001382330.1Re-query CCDS DB by Nucleotide ID:NM_001395401Re-query CCDS DB by Protein ID:NP_001382330Link to BLAST:NP_001382330.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001382330.1 275 Q9H6Y5-2 275 100% 0 0

Chromosomal Locations for CCDS 94607.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome X (NC_000023.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome XSee the combined annotation on chromosome X in Sequence Viewer

Chromosome Start Stop Links
X 49164761 49165090 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 49165190 49165361 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 49166074 49166399 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (828 nt):
ATGCCACTATTGTGGATCACCGGCCCCAGGTACCATCTCATCCTTCTATCGGAGGCCTCCTGCCTCAGGG
CAAACTATGTACACCTGTGTCCTTTATTCCAGCACCGTTGGTTAGAGACATGTAACGCACCTCCCCAATT
GATCCAGGGTAAGGCACGTAGTGCTCCGAAGCCATCCCAGGCCTCTGGTCATTTCTCTGTGGAGCTGGTT
CGCGGTTACGCAGGCTTTGGCCTCACCTTAGGTGGGGGCCGGGATGTAGCTGGGGACACTCCGCTGGCCG
TGCGCGGGCTGCTGAAGGATGGCCCAGCACAGCGCTGTGGTCGTTTGGAGGTCGGGGACCTCGTGCTCCA
CATCAACGGAGAGTCAACGCAGGGCCTCACCCATGCCCAGGCCGTGGAGCGGATCCGAGCTGGAGGCCCC
CAGCTCCACCTGGTTATTCGTCGGCCTCTGGAGACCCACCCTGGCAAGCCTCGAGGGGTGGGAGAGCCCC
GAAAAGGAGTTGTCCCGTCATGGCCAGATCGCAGCCCAGATCCTGGAGGGCCGGAGGTAACGGGGTCTCG
CAGCAGCAGCACTTCCCTAGTTCAGCACCCTCCATCCCGGACGACGCTCAAGAAGACCCGGGGCAGCCCG
GAGCCTAGTCCAGAGGCGGCCGCCGATGGCCCCACGGTTTCTCCTCCTGAGCGCCGCGCTGAGGATCCCA
ACGACCAGATCCCGGGTTCCCCGGGGCCCTGGCTAGTGCCCAGCGAGGAACGGCTCTCGCGGGCCCTAGG
GGTCCGGGGGGCAGCGCAGCTCGCTCAGGAGATGGCAGCCGGAAGGCGGAGACACTGA

Translation (275 aa):
MPLLWITGPRYHLILLSEASCLRANYVHLCPLFQHRWLETCNAPPQLIQGKARSAPKPSQASGHFSVELV
RGYAGFGLTLGGGRDVAGDTPLAVRGLLKDGPAQRCGRLEVGDLVLHINGESTQGLTHAQAVERIRAGGP
QLHLVIRRPLETHPGKPRGVGEPRKGVVPSWPDRSPDPGGPEVTGSRSSSTSLVQHPPSRTTLKKTRGSP
EPSPEAAADGPTVSPPERRAEDPNDQIPGSPGPWLVPSEERLSRALGVRGAAQLAQEMAAGRRRH


Links Key
 Links to:   History report
  BLAST report
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  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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