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Report for CCDS35368.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
35368.1 Public Homo sapiens X AMMECR1 24 110 108 CCDS HistoryNCBI Gene:9949Re-query CCDS DB by CCDS ID:35368.1Re-query CCDS DB by GeneID:9949See the combined annotation on chromosome X in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 35368.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000372059.6 ENSP00000361129.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000372059.6Link to Ensembl Protein Viewer:ENSP00000361129.2Re-query CCDS DB by Nucleotide ID:ENST00000372059Re-query CCDS DB by Protein ID:ENSP00000361129
Original member Current member NCBI NM_001025580.2 NP_001020751.1 Accepted alive Link to Nucleotide Sequence:NM_001025580.2Link to Protein Sequence:NP_001020751.1Re-query CCDS DB by Nucleotide ID:NM_001025580Re-query CCDS DB by Protein ID:NP_001020751Link to BLAST:NP_001020751.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001020751.1 296 Q9Y4X0-3 296 100% 0 0

Chromosomal Locations for CCDS 35368.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome X (NC_000023.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome XSee the combined annotation on chromosome X in Sequence Viewer

Chromosome Start Stop Links
X 110198520 110198634 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 110200954 110201050 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 110202446 110202536 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 110216518 110216632 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 110317599 110318071 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (891 nt):
ATGGCGGCGGGTTGCTGCGGGGTGAAGAAGCAGAAACTGTCCAGTTCGCCCCCCTCTGGCTCGGGTGGCG
GTGGTGGCGCCTCCTCCTCCTCCCACTGCAGCGGAGAGAGCCAGTGCCGAGCTGGGGAGCTGGGACTAGG
AGGCGCCGGTACGCGGCTCAACGGGCTGGGAGGTCTAACCGGAGGAGGTAGCGGCAGCGGCTGTACCCTC
TCTCCCCCCCAGGGCTGCGGCGGCGGCGGCGGGGGGATCGCCCTGTCGCCACCTCCGAGCTGCGGAGTGG
GGACCCTACTTTCTACCCCGGCCGCCGCCACCTCTTCCTCACCCTCCTCATCGTCCGCCGCCTCGTCCTC
ATCGCCGGGCTCCCGGAAGATGGTGGTGTCAGCAGAGATGTGCTGCTTTTGCTTCGATGTGCTCTACTGT
CACCTGTATGGATACCAGCAGCCCCGGACCCCCCGATTCACCAACGAGCCCTATGCCCTTAAAGATAGCC
GTTTTCCCCCAATGACAAGGGATGAGCTGCCACGGCTTTTCTGCTCAGTGTCTCTGCTCACTAACTTTGA
AGATGTCTGTGATTATTTGGACTGGGAGGTGGGTGTACATGGCATTAGAATAGAATTCATCAATGAAAAA
GGATCAAAACGCACCGCCACCTACCTACCGGAGGTTGCAAAGGAGCAAGGATGGGACCATATACAGACCA
TAGACTCCTTATTGAGGAAAGGAGGATACAAAGCTCCGATTACTAATGAATTCAGGAAAACCATAAAACT
GACCAGGTATCGTAGTGAAAAGATGACCCTGAGCTATGCTGAATACCTTGCTCATCGCCAGCATCATCAT
TTCCAAAATGGCATTGGGCATCCCCTTCCGCCATACAACCATTATTCCTGA

Translation (296 aa):
MAAGCCGVKKQKLSSSPPSGSGGGGGASSSSHCSGESQCRAGELGLGGAGTRLNGLGGLTGGGSGSGCTL
SPPQGCGGGGGGIALSPPPSCGVGTLLSTPAAATSSSPSSSSAASSSSPGSRKMVVSAEMCCFCFDVLYC
HLYGYQQPRTPRFTNEPYALKDSRFPPMTRDELPRLFCSVSLLTNFEDVCDYLDWEVGVHGIRIEFINEK
GSKRTATYLPEVAKEQGWDHIQTIDSLLRKGGYKAPITNEFRKTIKLTRYRSEKMTLSYAEYLAHRQHHH
FQNGIGHPLPPYNHYS


Links Key
 Links to:   History report
  BLAST report
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  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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