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Report for CCDS14692.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
14692.1 Public Homo sapiens X MAGEA8 24 110 108 CCDS HistoryNCBI Gene:4107Re-query CCDS DB by CCDS ID:14692.1Re-query CCDS DB by GeneID:4107See the combined annotation on chromosome X in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 14692.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000286482.6 ENSP00000286482.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000286482.6Link to Ensembl Protein Viewer:ENSP00000286482.1Re-query CCDS DB by Nucleotide ID:ENST00000286482Re-query CCDS DB by Protein ID:ENSP00000286482
Original member Current member EBI ENST00000535454.5 ENSP00000438293.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000535454.5Link to Ensembl Protein Viewer:ENSP00000438293.1Re-query CCDS DB by Nucleotide ID:ENST00000535454Re-query CCDS DB by Protein ID:ENSP00000438293
Original member Current member EBI ENST00000542674.5 ENSP00000443776.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000542674.5Link to Ensembl Protein Viewer:ENSP00000443776.1Re-query CCDS DB by Nucleotide ID:ENST00000542674Re-query CCDS DB by Protein ID:ENSP00000443776
Original member Current member NCBI NM_001166400.2 NP_001159872.1 Accepted alive Link to Nucleotide Sequence:NM_001166400.2Link to Protein Sequence:NP_001159872.1Re-query CCDS DB by Nucleotide ID:NM_001166400Re-query CCDS DB by Protein ID:NP_001159872Link to BLAST:NP_001159872.1
Original member Current member NCBI NM_001166401.2 NP_001159873.1 Accepted alive Link to Nucleotide Sequence:NM_001166401.2Link to Protein Sequence:NP_001159873.1Re-query CCDS DB by Nucleotide ID:NM_001166401Re-query CCDS DB by Protein ID:NP_001159873Link to BLAST:NP_001159873.1
Original member Current member NCBI NM_005364.5 NP_005355.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_005364.5Link to Protein Sequence:NP_005355.2Re-query CCDS DB by Nucleotide ID:NM_005364Re-query CCDS DB by Protein ID:NP_005355Link to BLAST:NP_005355.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001159872.1 318 P43361 318 100% 0 0
NP_001159873.1 318 P43361 318 100% 0 0
NP_005355.2 318 P43361 318 100% 0 0

Chromosomal Locations for CCDS 14692.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome X (NC_000023.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome XSee the combined annotation on chromosome X in Sequence Viewer

Chromosome Start Stop Links
X 149884273 149885229 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (957 nt):
ATGCTTCTTGGGCAGAAGAGTCAGCGCTACAAGGCTGAGGAAGGCCTTCAGGCCCAAGGAGAGGCACCAG
GGCTTATGGATGTGCAGATTCCCACAGCTGAGGAGCAGAAGGCTGCATCCTCCTCCTCTACTCTGATCAT
GGGAACCCTTGAGGAGGTGACTGATTCTGGGTCACCAAGTCCTCCCCAGAGTCCTGAGGGTGCCTCCTCT
TCCCTGACTGTCACCGACAGCACTCTGTGGAGCCAATCCGATGAGGGTTCCAGCAGCAATGAAGAGGAGG
GGCCAAGCACCTCCCCGGACCCAGCTCACCTGGAGTCCCTGTTCCGGGAAGCACTTGATGAGAAAGTGGC
TGAGTTAGTTCGTTTCCTGCTCCGCAAATATCAAATTAAGGAGCCGGTCACAAAGGCAGAAATGCTTGAG
AGTGTCATCAAAAATTACAAGAACCACTTTCCTGATATCTTCAGCAAAGCCTCTGAGTGCATGCAGGTGA
TCTTTGGCATTGATGTGAAGGAAGTGGACCCTGCCGGCCACTCCTACATCCTTGTCACCTGCCTGGGCCT
CTCCTATGATGGCCTGCTGGGTGATGATCAGAGTACGCCCAAGACCGGCCTCCTGATAATCGTCCTGGGC
ATGATCTTAATGGAGGGCAGCCGCGCCCCGGAGGAGGCAATCTGGGAAGCGTTGAGTGTGATGGGGCTGT
ATGATGGGAGGGAGCACAGTGTCTATTGGAAGCTCAGGAAGCTGCTCACCCAAGAGTGGGTGCAGGAGAA
CTACCTGGAGTACCGCCAGGCGCCCGGCAGTGATCCTGTGCGCTACGAGTTCCTGTGGGGTCCAAGGGCC
CTTGCTGAAACCAGCTATGTGAAAGTCCTGGAGCATGTGGTCAGGGTCAATGCAAGAGTTCGCATTTCCT
ACCCATCCCTGCATGAAGAGGCTTTGGGAGAGGAGAAAGGAGTTTGA

Translation (318 aa):
MLLGQKSQRYKAEEGLQAQGEAPGLMDVQIPTAEEQKAASSSSTLIMGTLEEVTDSGSPSPPQSPEGASS
SLTVTDSTLWSQSDEGSSSNEEEGPSTSPDPAHLESLFREALDEKVAELVRFLLRKYQIKEPVTKAEMLE
SVIKNYKNHFPDIFSKASECMQVIFGIDVKEVDPAGHSYILVTCLGLSYDGLLGDDQSTPKTGLLIIVLG
MILMEGSRAPEEAIWEALSVMGLYDGREHSVYWKLRKLLTQEWVQENYLEYRQAPGSDPVRYEFLWGPRA
LAETSYVKVLEHVVRVNARVRISYPSLHEEALGEEKGV


Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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