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Report for CCDS34927.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
34927.1 Public Homo sapiens 8 TSPYL5 24 110 108 CCDS HistoryNCBI Gene:85453Re-query CCDS DB by CCDS ID:34927.1See the combined annotation on chromosome 8 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 34927.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000322128.5 ENSP00000322802.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000322128.5Link to Ensembl Protein Viewer:ENSP00000322802.3Re-query CCDS DB by Nucleotide ID:ENST00000322128Re-query CCDS DB by Protein ID:ENSP00000322802
Original member Current member NCBI NM_033512.3 NP_277047.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_033512.3Link to Protein Sequence:NP_277047.2Re-query CCDS DB by Nucleotide ID:NM_033512Re-query CCDS DB by Protein ID:NP_277047Link to BLAST:NP_277047.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_277047.2 417 Q86VY4 417 100% 0 0

Chromosomal Locations for CCDS 34927.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 8 (NC_000008.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8See the combined annotation on chromosome 8 in Sequence Viewer

Chromosome Start Stop Links
8 97276591 97277844 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1254 nt):
ATGAGCGGCCGAAGTCGGGGTCGAAAGTCCTCCCGCGCCAAAAACCGGGGCAAAGGCCGCGCCAAAGCCC
GAGTCCGCCCTGCTCCGGACGACGCCCCGCGCGACCCGGACCCTTCACAGTACCAGAGTCTCGGGGAAGA
CACCCAGGCGGCACAGGTGCAGGCTGGCGCGGGGTGGGGTGGCCTGGAAGCCGCTGCGTCCGCGCAGCTC
CTCCGGCTCGGGGAGGAGGCCGCCTGCCGGCTCCCCCTGGACTGTGGCCTCGCGCTGCGGGCCCGAGCTG
CGGGGGACCACGGGCAGGCCGCGGCCAGGCCCGGCCCGGGGAAGGCCGCATCTCTCTCGGAGCGCCTGGC
CGCAGACACTGTCTTCGTGGGAACAGCGGGAACCGTGGGAAGGCCGAAAAATGCCCCCCGCGTTGGAAAC
CGGCGTGGCCCTGCCGGGAAGAAGGCCCCAGAAACCTGTAGCACCGCGGGGAGGGGGCCTCAGGTCATAG
CTGGTGGGAGGCAGAAGAAAGGGGCGGCAGGGGAGAATACCTCGGTGTCAGCTGGGGAGGAAAAGAAGGA
AGAGAGGGATGCAGGGTCGGGGCCCCCAGCGACGGAAGGCAGCATGGATACGCTGGAGAACGTGCAGCTG
AAGCTGGAGAACATGAACGCCCAGGCGGACAGGGCCTACCTTCGGCTCTCCAGGAAGTTTGGGCAGTTGC
GACTGCAGCACTTGGAGCGCAGGAACCACCTCATCCAAAATATCCCGGGCTTCTGGGGGCAAGCATTTCA
GAACCATCCCCAGCTAGCATCCTTTCTGAATAGCCAAGAGAAAGAGGTACTGAGCTACTTAAACAGCTTG
GAAGTGGAAGAGCTCGGCCTTGCCAGATTGGGCTACAAAATCAAGTTCTACTTCGATCGCAACCCGTATT
TCCAAAATAAGGTGCTCATCAAGGAATATGGGTGTGGTCCTTCTGGCCAGGTGGTGTCTCGTTCTACTCC
AATCCAGTGGCTCCCAGGGCATGATCTCCAGTCCCTAAGCCAGGGAAACCCAGAAAACAACCGTAGTTTC
TTTGGGTGGTTTTCAAACCACAGCTCCATTGAGTCTGACAAGATTGTGGAGATAATCAACGAAGAATTGT
GGCCCAATCCCTTGCAGTTCTACCTTTTGAGTGAAGGGGCTCGTGTAGAGAAAGGAAAGGAAAAAGAAGG
CAGGCAAGGTCCAGGAAAGCAGCCAATGGAGACTACTCAGCCTGGGGTGAGCCAATCCAACTGA

Translation (417 aa):
MSGRSRGRKSSRAKNRGKGRAKARVRPAPDDAPRDPDPSQYQSLGEDTQAAQVQAGAGWGGLEAAASAQL
LRLGEEAACRLPLDCGLALRARAAGDHGQAAARPGPGKAASLSERLAADTVFVGTAGTVGRPKNAPRVGN
RRGPAGKKAPETCSTAGRGPQVIAGGRQKKGAAGENTSVSAGEEKKEERDAGSGPPATEGSMDTLENVQL
KLENMNAQADRAYLRLSRKFGQLRLQHLERRNHLIQNIPGFWGQAFQNHPQLASFLNSQEKEVLSYLNSL
EVEELGLARLGYKIKFYFDRNPYFQNKVLIKEYGCGPSGQVVSRSTPIQWLPGHDLQSLSQGNPENNRSF
FGWFSNHSSIESDKIVEIINEELWPNPLQFYLLSEGARVEKGKEKEGRQGPGKQPMETTQPGVSQSN


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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