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Report for CCDS10784.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
10784.1 Public Homo sapiens 16 CCDC102A 24 110 108 CCDS HistoryNCBI Gene:92922Re-query CCDS DB by CCDS ID:10784.1See the combined annotation on chromosome 16 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 10784.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000258214.3 ENSP00000258214.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000258214.3Link to Ensembl Protein Viewer:ENSP00000258214.2Re-query CCDS DB by Nucleotide ID:ENST00000258214Re-query CCDS DB by Protein ID:ENSP00000258214
Original member Current member NCBI NM_033212.4 NP_149989.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_033212.4Link to Protein Sequence:NP_149989.2Re-query CCDS DB by Nucleotide ID:NM_033212Re-query CCDS DB by Protein ID:NP_149989Link to BLAST:NP_149989.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_149989.2 550 Q96A19 550 100% 0 0

Chromosomal Locations for CCDS 10784.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 16 (NC_000016.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16See the combined annotation on chromosome 16 in Sequence Viewer

Chromosome Start Stop Links
16 57512741 57512870 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 57515341 57515444 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 57516293 57516463 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 57518068 57518277 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 57518625 57518741 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 57521068 57521176 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 57525901 57526127 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 57528593 57529177 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1653 nt):
ATGAGCCACGGGCCCAGCCCCCGGCTGGCCGAGTCCCCGCAGCTGTCCAAGGGCAGCCTCCTGACCATCC
TGGGCAGCCCGTCGCCGGAGCGCATGGGGCCTGCCGACTCCTTGCCGCCCACGCCGCCCAGCGGCACGCC
CTCGCCCGGGCCGCCGCCCGCACTGCCCCTGCCCCCCGCGCCCGCGCTGCTGGCCGACGGCGACTGGGAG
AGCCGCGAGGAGCTGCGGCTGCGGGAGCTGGAGGAGGCGCGGGCGCGGGCGGCGCAGATGGAGAAGACCA
TGCGCCGGTGGTCGGACTGCACTGCCAATTGGCGCGAGAAATGGAGCAAGGTGCGCGCTGAGCGCAACCG
CGCGCGCGAGGAGGTGCGCCAGCTGCGCCAGCGCCTGGACGCGCTCACCAAGGAGCTGGCGGGCGCACGG
CGCGAGCGCCAAGAGGCGCAGGGCGAGTGCGAGGCACGGGGCCGCGAGCTGGCGCGGCTGAGGGGCGCCC
GGGGGGTCGCCGACCAGACGCGCGACGGCCCCGAGCCGGAAGCGGAGCGCGAGCCAGTGCGTGACGTCGG
GTCCGAGAGGCCGCCAGGCAGCCAGGAACTGGAGCTGGTGGAGAGCCTGCTGAAGAGCATGCCAGAGGAG
TCTGAGGACTGCTGGGAGGCGCGCAGCCTGGGGGCTGGGGGCCCGCGGGGCAGCTCAGGCCGCCAGGAGC
GCAGCCGGCTACCCTGGGAGGACACAGCTGCCACGGAGGAGGAGGCCTCCAAGTTGACCGCCCTGCGGCT
ACGGCTGGATGAGTCCCAGAAGGTGCTGCTCAAGGAGCGAGAGGATAAACTGGCGTTGAGCAGGAACATT
GAGAAGCTAGAGGGGGAGCTCAGCCAGTGGAAGATCAAGTATGAGGAGCTGAGCAAGACCAAGCAGGAGA
TGCTCAAGCAGCTCAGCATCCTGAAGGAGGCGCACCAGGACGAGCTGGGCCGCATGTCTGAGGACCTGGA
AGATGAGCTCGGTGCACGCTCCAGCATGGACCGGAAAATGGCCGAGCTGAGGGGCGAGATGGAGCGGCTG
CAGGCCGAAAACGCTGCGGAGTGGGGCCGCCGGGAGCGGCTGGAGACAGAGAAACTGGGCCTTGAGCGGG
AGAACAAGAAGCTGCGGGCACAGGTCGGAGACCTGGAGGAGGCGCTGGCCCGGCGGCGGCGGCAAACAGC
CAGCGCACTGGACTGCGACCTGAGGGCCAGCCAGGCCGCGCTCTTCGAGAAGAACAAGGAGCTGGCAGAC
CTGAAGCATGTGCATGGCAAGCTGAAGAAGCAGTTCCAGGAGAAGGTGGCAGAGCTGGCACATGCCAACC
GGCGGGTGGAGCAGCACGAGGCTGAGGTGAAGAAGCTGCGGCTGCGGGTGGAGGAGCTCAAGAAGGAGCT
GGCCCAGGCTGAGGACGAGCTGGACGAGGCCCACAACCAGGCACGTAAGCTGCAGCGGTCGCTGGACGAG
CAGACGGAGCAGAGCGAGAACCTGCAAGTGCAACTGGAGCACCTGCAGTCCAGGCTCCGCAGGCAGCAGC
AGAACGCTCCCCTCTTCGGGAAGATCCGCAGTGCTCGCTTTGGCACCGAGGAGGCCGAGGATGGAACCAG
TGACCTGGACGAGGACGAGGACCTGCAAATCCAGGTGGCCTAG

Translation (550 aa):
MSHGPSPRLAESPQLSKGSLLTILGSPSPERMGPADSLPPTPPSGTPSPGPPPALPLPPAPALLADGDWE
SREELRLRELEEARARAAQMEKTMRRWSDCTANWREKWSKVRAERNRAREEVRQLRQRLDALTKELAGAR
RERQEAQGECEARGRELARLRGARGVADQTRDGPEPEAEREPVRDVGSERPPGSQELELVESLLKSMPEE
SEDCWEARSLGAGGPRGSSGRQERSRLPWEDTAATEEEASKLTALRLRLDESQKVLLKEREDKLALSRNI
EKLEGELSQWKIKYEELSKTKQEMLKQLSILKEAHQDELGRMSEDLEDELGARSSMDRKMAELRGEMERL
QAENAAEWGRRERLETEKLGLERENKKLRAQVGDLEEALARRRRQTASALDCDLRASQAALFEKNKELAD
LKHVHGKLKKQFQEKVAELAHANRRVEQHEAEVKKLRLRVEELKKELAQAEDELDEAHNQARKLQRSLDE
QTEQSENLQVQLEHLQSRLRRQQQNAPLFGKIRSARFGTEEAEDGTSDLDEDEDLQIQVA


Links Key
 Links to:   History report
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  Nucleotide report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
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