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Report for CCDS1960.2 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
1960.2 Public Homo sapiens 2 MRPL19 24 110 108 CCDS HistoryNCBI Gene:9801Re-query CCDS DB by CCDS ID:1960.2See the combined annotation on chromosome 2 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq, Havana and CCDS collaboration)

Sequence IDs included in CCDS 1960.2

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000393909.7 ENSP00000377486.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000393909.7Link to Ensembl Protein Viewer:ENSP00000377486.2Re-query CCDS DB by Nucleotide ID:ENST00000393909Re-query CCDS DB by Protein ID:ENSP00000377486
Original member Current member EBI ENST00000409374.5 ENSP00000387284.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000409374.5Link to Ensembl Protein Viewer:ENSP00000387284.1Re-query CCDS DB by Nucleotide ID:ENST00000409374Re-query CCDS DB by Protein ID:ENSP00000387284
Original member Current member NCBI NM_014763.4 NP_055578.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_014763.4Link to Protein Sequence:NP_055578.2Re-query CCDS DB by Nucleotide ID:NM_014763Re-query CCDS DB by Protein ID:NP_055578Link to BLAST:NP_055578.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_055578.2 292 P49406 292 100% 0 0

Chromosomal Locations for CCDS 1960.2

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 2 (NC_000002.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2See the combined annotation on chromosome 2 in Sequence Viewer

Chromosome Start Stop Links
2 75646808 75646910 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 75647102 75647219 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 75652142 75652260 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 75652523 75652657 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 75654736 75654917 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 75655064 75655285 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (879 nt):
ATGGCGGCCTGCATTGCAGCGGGGCACTGGGCTGCAATGGGCCTAGGCCGGAGTTTCCAAGCCGCCAGGA
CTCTGCTCCCCCCGCCGGCCTCTATCGCCTGCAGGGTCCACGCGGGGCCTGTCCGGCAGCAGAGCACTGG
GCCTTCCGAGCCCGGTGCGTTCCAACCGCCGCCGAAACCGGTCATCGTGGACAAGCACCGCCCCGTGGAA
CCGGAACGCAGGTTCTTGAGTCCTGAATTCATTCCTCGAAGGGGAAGAACAGATCCTCTGAAATTTCAAA
TAGAAAGAAAAGATATGTTAGAAAGGAGAAAAGTACTCCACATTCCAGAGTTCTATGTTGGAAGTATTCT
TCGTGTTACTACAGCTGACCCATATGCCAGTGGAAAAATCAGCCAGTTTCTGGGGATTTGCATTCAGAGA
TCAGGAAGAGGACTTGGAGCTACTTTCATCCTTAGGAATGTTATCGAAGGACAAGGTGTCGAGATTTGCT
TTGAACTTTATAATCCTCGGGTCCAGGAGATTCAGGTGGTCAAATTAGAGAAACGGCTGGATGATAGCTT
GCTATACTTACGAGATGCCCTTCCTGAATATAGCACTTTTGATGTGAATATGAAGCCAGTAGTACAAGAG
CCTAACCAAAAAGTTCCTGTTAATGAGCTGAAAGTAAAAATGAAGCCTAAGCCCTGGTCTAAACGCTGGG
AACGTCCAAATTTTAATATTAAAGGAATCAGATTTGATCTTTGTTTAACTGAACAGCAAATGAAAGAAGC
TCAGAAGTGGAATCAGCCATGGCTTGAATTTGATATGATGAGGGAATATGATACTTCAAAAATTGAAGCT
GCAATATGGAAGGAAATTGAAGCGTCGAAAAGGTCTTGA

Translation (292 aa):
MAACIAAGHWAAMGLGRSFQAARTLLPPPASIACRVHAGPVRQQSTGPSEPGAFQPPPKPVIVDKHRPVE
PERRFLSPEFIPRRGRTDPLKFQIERKDMLERRKVLHIPEFYVGSILRVTTADPYASGKISQFLGICIQR
SGRGLGATFILRNVIEGQGVEICFELYNPRVQEIQVVKLEKRLDDSLLYLRDALPEYSTFDVNMKPVVQE
PNQKVPVNELKVKMKPKPWSKRWERPNFNIKGIRFDLCLTEQQMKEAQKWNQPWLEFDMMREYDTSKIEA
AIWKEIEASKRS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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