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Report for CCDS71922.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
71922.1 Public Mus musculus 7 Blvrb 23 108 98 CCDS HistoryNCBI Gene:233016Re-query CCDS DB by CCDS ID:71922.1Re-query CCDS DB by GeneID:233016See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 16, NCBI annotation release 104, Ensembl annotation release 75

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 71922.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000108357.7 ENSMUSP00000103994.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000108357.7Link to Ensembl Protein Viewer:ENSMUSP00000103994.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000108357Re-query CCDS DB by Protein ID:ENSMUSP00000103994
Original member Current member NCBI NM_001290525.1 NP_001277454.1 Accepted alive Link to Nucleotide Sequence:NM_001290525.1Link to Protein Sequence:NP_001277454.1Re-query CCDS DB by Nucleotide ID:NM_001290525Re-query CCDS DB by Protein ID:NP_001277454Link to BLAST:NP_001277454.1

Chromosomal Locations for CCDS 71922.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 7 (NC_000073.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 27459577 27459652 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 27462567 27462695 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 27465720 27465877 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (363 nt):
ATGTCCGAGGGCACCCGGAACATCGTGACAGCCATGAAGGCACATGGAGTGGACAAGGTCGTGGCCTGCA
CCTCGGCCTTCCTACTATGGGACCCGACCAAGGTGCCCCCACGCCTGCAGGACGTGACCGATGACCACAT
CCGGATGCATAAGATTCTGCAAGAGTCAGGGCTGAAATACGTGGCAGTGATGCCCCCACACATAGGAGAC
CAACCACTAACTGGGGCCTACACAGTGACCCTGGATGGACGAGGGCCCTCGAGGGTCATATCCAAGCATG
ACCTGGGCCACTTCATGCTACGGTGCCTCACCACCAATGAGTATGACGGACACACCACCTACCCCTCCCA
CCAGTATGACTAG

Translation (120 aa):
MSEGTRNIVTAMKAHGVDKVVACTSAFLLWDPTKVPPRLQDVTDDHIRMHKILQESGLKYVAVMPPHIGD
QPLTGAYTVTLDGRGPSRVISKHDLGHFMLRCLTTNEYDGHTTYPSHQYD


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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