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Report for CCDS22633.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
22633.1 Public Mus musculus 8 Prmt7 23 108 98 CCDS HistoryNCBI Gene:214572Re-query CCDS DB by CCDS ID:22633.1Re-query CCDS DB by GeneID:214572See the combined annotation on chromosome 8 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 22633.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000071592.11 ENSMUSP00000071521.5 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000071592.11Link to Ensembl Protein Viewer:ENSMUSP00000071521.5Re-query CCDS DB by Nucleotide ID:ENSMUST00000071592Re-query CCDS DB by Protein ID:ENSMUSP00000071521
Original member Current member NCBI NM_145404.1 NP_663379.1 Accepted alive Link to Nucleotide Sequence:NM_145404.1Link to Protein Sequence:NP_663379.1Re-query CCDS DB by Nucleotide ID:NM_145404Re-query CCDS DB by Protein ID:NP_663379Link to BLAST:NP_663379.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_663379.1 692 Q922X9 692 100% 0 0

Chromosomal Locations for CCDS 22633.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 8 (NC_000074.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8See the combined annotation on chromosome 8 in Sequence Viewer

Chromosome Start Stop Links
8 106212477 106212571 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 106217244 106217280 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 106219920 106220069 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 106227211 106227319 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 106234848 106234960 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 106236794 106237035 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 106237222 106237402 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 106241186 106241313 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 106242111 106242246 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 106243295 106243378 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 106243802 106243849 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 106244657 106244746 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 106247063 106247224 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 106248349 106248423 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 106250308 106250468 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 106251197 106251293 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 106251479 106251649 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2079 nt):
ATGAAGGTCTTCTGTGGCCGTGCCAATCCTACCACGGGATCCCTGGAGTGGCTGGAGGAGGATGAACACT
ATGATTACCACCAGGAGATTGCCAGGTCATCCTATGCCGACATGCTACATGACAAAGACAGAAATATAAA
ATACTACCAGGGTATCCGGGCAGCTGTGAGCAGGGTGAAAGACAGAGGACAGAAGGCCTTGGTTCTTGAC
ATTGGCACTGGCACAGGCCTCTTGTCAATGATGGCAGTTACTGCAGGGGCTGACTTCTGCTATGCTATCG
AGGTTTTTAAGCCTATGGCTGAGGCTGCTGTGAAGATTGTGGAGAGGAATGGCTTCAGTGATAAGATTAA
AGTCATTAACAAGCACTCCACTGAGGTGACAGTCGGACCAGATGGTGACTTGCCGTGTCGTGCTAACATT
CTGATCACGGAGCTGTTTGACACAGAGCTGATTGGGGAGGGAGCGCTGCCCTCTTATGAGCATGCACACA
AGCATCTTGTCCAGGAAGACTGCGAGGCAGTGCCACACAGGGCAACTGTCTATGCCCAGCTGGTGGAGTC
CCGAAGGATGTGGTCCTGGAACAAGCTGTTTCCCGTCCGTGTCCGGACGAGTCTAGGCGAGCAGGTCATC
GTCCCCCCCTCAGAATTGGAGAGGTGTCCTGGTGCGCCTTCAGTCTGTGACATTCAGCTGAACCAGGTGT
CGCCTGCTGACTTCACTGTCCTCAGTGATGTGCTGCCAATGTTCAGCGTGGACTTCAGCAAGCAAGTCAG
CAGCTCGGCAGCGTGCCATAGCAGGCAGTTTGTACCTTTGGCGTCTGGCCAAGCACAGGTGGTTCTGTCC
TGGTGGGACATTGAAATGGACCCTGAGGGCAAGATCAAGTGCACCATGGCACCCTTTTGGGCACAGACAG
ATCCGCAGGAGCTTCAGTGGCGGGACCACTGGATGCAGTGTGTGTACTTCCTGCCGCAGGAGGAGCCTGT
TGTGCAGGGCTCACCCCGGTGCCTGGTAGCCCACCATGATGACTACTGTGTGTGGTACAGCCTTCAGAGA
ACCAGCCCTGATGAGAACGACAGCGCCTACCAAGTGCGACCTGTGTGTGACTGTCAGGCTCACTTGCTCT
GGAACCGGCCTCGGTTTGGAGAAATCAATGATCAGGACAGAACTGATCACTATGCCCAGGCCCTGAGGAC
TGTGCTGCTGCCAGGTAGCGTCTGCCTTTGTGTGAGTGATGGCAGTCTCCTCTCCATGCTGGCCCATCAC
CTCGGAGCGGAGCAGGTGTTTACAGTTGAGAGTTCAGTAGCTTCCTATAGACTGATGAAAAGGATCTTCA
AGGTTAACCACTTGGAAGATAAAATCAGTGTCATCAATAAACGGCCTGAGTTGCTGACAGCTGCAGACCT
GGAGGGCAAGAAGGTCTCCCTCCTCCTGGGTGAACCCTTTTTCACCACCAGCCTGCTGCCATGGCACAAC
CTGTACTTCTGGTATGTCCGTACCTCTGTGGACCAGCACCTAGCACCTGGAGCTGTGGTGATGCCTCAGG
CTGCCTCACTGCATGCCGTGATTGTGGAGTTCAGGGACCTGTGGCGGATCCGGAGTCCTTGCGGTGACTG
CGAAGGTTTTGATGTGCACATCATGGATGATATGATCAAGCACTCCCTGGATTTCCGAGAGAGCAGAGAG
GCAGAGCCACACCCACTGTGGGAATACCCCTGCAGAAGCCTCTCCAAGCCTCAAGAGATCCTGACTTTTG
ATTTCCAGCAGCCCATCCCCCAACAGCCTATGCAATCCAAGGGCACAATGGAGCTGACAAGACCCGGGAA
GAGCCATGGGGCTGTCCTGTGGATGGAGTATCAGCTCACTCCAGACAGCACGATCAGCACTGGCCTCATA
AACCCTGCAGAAGACAAGGGGGACTGCTGCTGGAACCCCCACTGCAAGCAAGCTGTGTACTTCCTCAGCA
CCACGCTGGATCTCAGAGTGCCTCTGAATGGCCCTCGGTCAGTCAGCTATGTTGTGGAGTTTCACCCCCT
CACTGGAGACATCACCATGGAGTTTAGGCTTGCAGACACCTTGAGCTGA

Translation (692 aa):
MKVFCGRANPTTGSLEWLEEDEHYDYHQEIARSSYADMLHDKDRNIKYYQGIRAAVSRVKDRGQKALVLD
IGTGTGLLSMMAVTAGADFCYAIEVFKPMAEAAVKIVERNGFSDKIKVINKHSTEVTVGPDGDLPCRANI
LITELFDTELIGEGALPSYEHAHKHLVQEDCEAVPHRATVYAQLVESRRMWSWNKLFPVRVRTSLGEQVI
VPPSELERCPGAPSVCDIQLNQVSPADFTVLSDVLPMFSVDFSKQVSSSAACHSRQFVPLASGQAQVVLS
WWDIEMDPEGKIKCTMAPFWAQTDPQELQWRDHWMQCVYFLPQEEPVVQGSPRCLVAHHDDYCVWYSLQR
TSPDENDSAYQVRPVCDCQAHLLWNRPRFGEINDQDRTDHYAQALRTVLLPGSVCLCVSDGSLLSMLAHH
LGAEQVFTVESSVASYRLMKRIFKVNHLEDKISVINKRPELLTAADLEGKKVSLLLGEPFFTTSLLPWHN
LYFWYVRTSVDQHLAPGAVVMPQAASLHAVIVEFRDLWRIRSPCGDCEGFDVHIMDDMIKHSLDFRESRE
AEPHPLWEYPCRSLSKPQEILTFDFQQPIPQQPMQSKGTMELTRPGKSHGAVLWMEYQLTPDSTISTGLI
NPAEDKGDCCWNPHCKQAVYFLSTTLDLRVPLNGPRSVSYVVEFHPLTGDITMEFRLADTLS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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