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Report for CCDS3097.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
3097.1 Public Homo sapiens 3 A4GNT 24 110 108 CCDS HistoryNCBI Gene:51146Re-query CCDS DB by CCDS ID:3097.1Re-query CCDS DB by GeneID:51146See the combined annotation on chromosome 3 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 3097.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000236709.4 ENSP00000236709.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000236709.4Link to Ensembl Protein Viewer:ENSP00000236709.3Re-query CCDS DB by Nucleotide ID:ENST00000236709Re-query CCDS DB by Protein ID:ENSP00000236709
Original member Current member NCBI NM_016161.3 NP_057245.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_016161.3Link to Protein Sequence:NP_057245.1Re-query CCDS DB by Nucleotide ID:NM_016161Re-query CCDS DB by Protein ID:NP_057245Link to BLAST:NP_057245.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_057245.1 340 Q9UNA3 340 100% 0 0

Chromosomal Locations for CCDS 3097.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 3 (NC_000003.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3See the combined annotation on chromosome 3 in Sequence Viewer

Chromosome Start Stop Links
3 138124264 138124878 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 138130849 138131256 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1023 nt):
ATGCGGAAGGAGCTCCAGCTCTCCCTGTCAGTCACCTTGCTGCTTGTCTGTGGCTTCCTCTACCAGTTCA
CCCTGAAGTCCAGCTGCCTCTTCTGTTTGCCTTCTTTCAAGTCCCACCAGGGGCTGGAAGCCCTCCTGAG
CCACAGACGTGGCATTGTGTTTCTAGAGACCTCAGAGAGAATGGAGCCACCCCATTTGGTCTCCTGTTCC
GTAGAGTCTGCTGCCAAGATTTATCCTGAGTGGCCTGTGGTGTTCTTTATGAAGGGTCTTACTGATTCCA
CACCGATGCCCTCAAACTCCACATACCCAGCTTTTTCCTTCCTGTCAGCAATAGACAACGTTTTCCTCTT
CCCTTTGGATATGAAAAGGCTGCTTGAAGACACACCATTGTTTTCATGGTACAATCAAATCAACGCCAGC
GCAGAGAGAAACTGGCTCCACATCAGCTCGGATGCATCCCGCCTGGCCATCATCTGGAAATACGGTGGCA
TCTACATGGACACCGATGTCATCTCCATCAGGCCCATCCCTGAGGAGAACTTTTTGGCTGCGCAGGCTTC
TCGGTACTCTAGTAATGGAATATTTGGGTTCCTCCCCCACCACCCCTTTTTGTGGGAATGCATGGAAAAC
TTTGTTGAACACTATAATTCAGCCATTTGGGGCAACCAAGGCCCTGAGTTGATGACAAGGATGTTGAGGG
TATGGTGTAAACTTGAAGACTTCCAGGAGGTGAGCGACCTCAGGTGTCTGAACATATCCTTCTTACACCC
CCAAAGATTTTACCCCATCTCCTATCGAGAGTGGAGGCGCTACTATGAAGTGTGGGATACAGAGCCAAGC
TTCAATGTCTCTTATGCCCTGCATTTGTGGAACCACATGAACCAGGAGGGGCGGGCTGTGATTAGAGGAA
GCAACACACTGGTGGAAAATCTCTATCGCAAGCACTGTCCCAGGACTTACAGGGACCTGATTAAAGGCCC
AGAGGGGTCAGTGACTGGGGAGCTGGGTCCAGGTAACAAATAA

Translation (340 aa):
MRKELQLSLSVTLLLVCGFLYQFTLKSSCLFCLPSFKSHQGLEALLSHRRGIVFLETSERMEPPHLVSCS
VESAAKIYPEWPVVFFMKGLTDSTPMPSNSTYPAFSFLSAIDNVFLFPLDMKRLLEDTPLFSWYNQINAS
AERNWLHISSDASRLAIIWKYGGIYMDTDVISIRPIPEENFLAAQASRYSSNGIFGFLPHHPFLWECMEN
FVEHYNSAIWGNQGPELMTRMLRVWCKLEDFQEVSDLRCLNISFLHPQRFYPISYREWRRYYEVWDTEPS
FNVSYALHLWNHMNQEGRAVIRGSNTLVENLYRKHCPRTYRDLIKGPEGSVTGELGPGNK


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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