NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq


Report for CCDS10445.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
10445.1 Public Homo sapiens 16 NUBP2 24 110 108 CCDS HistoryNCBI Gene:10101Re-query CCDS DB by CCDS ID:10445.1Re-query CCDS DB by GeneID:10101See the combined annotation on chromosome 16 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 10445.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000262302.14 ENSP00000262302.9 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000262302.14Link to Ensembl Protein Viewer:ENSP00000262302.9Re-query CCDS DB by Nucleotide ID:ENST00000262302Re-query CCDS DB by Protein ID:ENSP00000262302
Original member Current member NCBI NM_012225.4 NP_036357.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_012225.4Link to Protein Sequence:NP_036357.1Re-query CCDS DB by Nucleotide ID:NM_012225Re-query CCDS DB by Protein ID:NP_036357Link to BLAST:NP_036357.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_036357.1 271 Q9Y5Y2 271 100% 0 0

Chromosomal Locations for CCDS 10445.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 16 (NC_000016.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16See the combined annotation on chromosome 16 in Sequence Viewer

Chromosome Start Stop Links
16 1783021 1783036 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 1786537 1786655 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 1786757 1786955 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 1787677 1787831 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 1787941 1788051 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 1788138 1788207 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 1788569 1788714 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (816 nt):
ATGGAGGCGGCGGCCGAGCCTGGAAACCTGGCCGGCGTCAGGCACATCATCCTGGTCCTCTCAGGAAAGG
GGGGCGTTGGGAAAAGCACCATCTCCACGGAGCTGGCCCTGGCACTGCGCCATGCAGGCAAGAAGGTGGG
AATCCTGGATGTGGACCTGTGTGGCCCCAGTATCCCCCGCATGCTCGGGGCGCAGGGCAGGGCTGTGCAC
CAGTGCGACCGCGGCTGGGCACCCGTCTTCCTGGACCGGGAGCAGAGCATCTCGCTCATGTCTGTGGGCT
TCCTGCTGGAGAAGCCGGACGAGGCCGTGGTGTGGAGAGGCCCCAAGAAAAACGCGCTGATAAAGCAGTT
TGTGTCCGACGTGGCCTGGGGGGAGCTGGACTACCTGGTGGTGGACACGCCCCCGGGGACCTCCGATGAG
CACATGGCCACCATAGAAGCCCTGCGTCCCTACCAGCCCCTGGGGGCCCTCGTGGTCACCACGCCCCAGG
CGGTGTCCGTGGGGGACGTGAGGCGCGAGCTGACCTTCTGTAGGAAGACGGGCTTGCGGGTGATGGGAAT
CGTGGAGAATATGAGCGGCTTCACCTGCCCACACTGCACGGAGTGCACCAGCGTCTTCTCCAGGGGCGGC
GGAGAGGAGCTGGCCCAGCTCGCCGGGGTGCCCTTCTTAGGCTCCGTGCCCCTGGACCCTGCGCTCATGA
GGACCCTGGAGGAGGGCCACGACTTCATCCAGGAGTTCCCTGGGAGCCCCGCCTTCGCTGCACTCACCTC
CATAGCCCAGAAGATTCTGGACGCGACGCCCGCGTGCCTCCCCTGA

Translation (271 aa):
MEAAAEPGNLAGVRHIILVLSGKGGVGKSTISTELALALRHAGKKVGILDVDLCGPSIPRMLGAQGRAVH
QCDRGWAPVFLDREQSISLMSVGFLLEKPDEAVVWRGPKKNALIKQFVSDVAWGELDYLVVDTPPGTSDE
HMATIEALRPYQPLGALVVTTPQAVSVGDVRRELTFCRKTGLRVMGIVENMSGFTCPHCTECTSVFSRGG
GEELAQLAGVPFLGSVPLDPALMRTLEEGHDFIQEFPGSPAFAALTSIAQKILDATPACLP


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH