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Report for CCDS34315.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
34315.1 Public Homo sapiens 5 MAML1 24 110 108 CCDS HistoryNCBI Gene:9794Re-query CCDS DB by CCDS ID:34315.1Re-query CCDS DB by GeneID:9794See the combined annotation on chromosome 5 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 34315.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000292599.4 ENSP00000292599.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000292599.4Link to Ensembl Protein Viewer:ENSP00000292599.3Re-query CCDS DB by Nucleotide ID:ENST00000292599Re-query CCDS DB by Protein ID:ENSP00000292599
Original member Current member NCBI NM_014757.5 NP_055572.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_014757.5Link to Protein Sequence:NP_055572.1Re-query CCDS DB by Nucleotide ID:NM_014757Re-query CCDS DB by Protein ID:NP_055572Link to BLAST:NP_055572.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_055572.1 1016 Q92585 1016 100% 0 0

Chromosomal Locations for CCDS 34315.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 5 (NC_000005.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5See the combined annotation on chromosome 5 in Sequence Viewer

Chromosome Start Stop Links
5 179733113 179733427 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 179765326 179766741 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 179768850 179769089 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 179771147 179771243 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 179773895 179774877 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (3051 nt):
ATGGTGCTGCCCACCTGCCCCATGGCGGAGTTCGCGCTGCCGCGGCACAGCGCGGTCATGGAGCGCCTTC
GCCGGCGCATCGAGCTGTGCCGGCGCCACCACAGCACCTGCGAGGCCCGCTACGAGGCCGTGTCGCCCGA
GCGCCTGGAGCTGGAGCGCCAACACACCTTCGCCCTGCACCAGCGCTGCATCCAGGCCAAGGCCAAGCGC
GCCGGGAAGCACAGGCAGCCGCCCGCCGCCACGGCCCCGGCGCCCGCCGCCCCGGCCCCGCGCCTGGACG
CCGCTGACGGCCCCGAGCACGGCCGCCCGGCCACGCATCTTCATGATACAGTTAAGAGGAATCTTGACAG
CGCCACTTCCCCTCAGAATGGCGATCAACAGAATGGCTACGGGGACCTCTTTCCTGGGCATAAGAAGACT
CGCCGGGAGGCCCCTCTGGGAGTTGCCATCTCTTCCAATGGACTGCCTCCAGCCTCCCCCCTCGGTCAGT
CTGACAAGCCTTCTGGAGCCGACGCCCTGCAGTCCAGTGGGAAGCACTCTCTGGGGCTAGACTCTCTCAA
CAAAAAGCGTCTGGCTGACTCCAGCCTTCACTTGAATGGAGGCAGTAACCCCAGTGAGTCATTTCCTCTG
AGCCTGAATAAAGAACTGAAGCAGGAGCCTGTCGAAGACCTGCCTTGCATGATCACTGGGACTGTCGGCT
CCATATCGCAAAGCAACCTCATGCCAGACCTCAACCTTAACGAGCAGGAGTGGAAGGAGCTCATCGAGGA
GCTGAACAGGTCGGTGCCCGATGAAGACATGAAGGACCTGTTTAATGAGGACTTCGAGGAGAAGAAGGAC
CCAGAGTCTTCTGGCTCTGCCACACAAACCCCCTTGGCACAGGACATTAATATTAAGACGGAATTCTCTC
CAGCAGCCTTTGAGCAAGAACAGTTAGGCTCTCCACAAGTGAGGGCCGGGTCTGCAGGGCAGACCTTTCT
GGGGCCTTCCTCTGCCCCTGTGAGTACAGATTCCCCCAGCCTAGGGGGCTCCCAAACCTTATTCCACACC
TCTGGTCAGCCCCGGGCGGACAATCCCAGTCCAAACCTGATGCCGGCATCAGCCCAGGCCCAGAACGCAC
AAAGAGCCCTTGCAGGTGTGGTATTGCCCAGTCAGGGCCCAGGAGGGGCCTCAGAGCTGTCCTCTGCCCA
CCAGCTCCAGCAGATCGCTGCCAAGCAGAAGCGCGAGCAGATGCTCCAGAACCCACAGCAGGCCACCCCG
GCACCAGCCCCGGGCCAGATGTCCACATGGCAGCAGACGGGGCCCTCCCACAGTTCCTTAGATGTCCCTT
ACCCCATGGAGAAGCCTGCCAGCCCTTCCAGCTACAAGCAAGACTTCACTAACTCCAAACTGCTCATGAT
GCCTAGTGTGAATAAGAGTTCCCCTCGGCCCGGAGGCCCCTACCTCCAGCCCAGCCATGTGAACCTGCTG
AGTCACCAGCCACCGAGTAACTTGAATCAGAACTCCGCGAATAACCAGGGGTCTGTGCTGGACTACGGCA
ATACAAAACCCCTTTCTCATTACAAAGCGGACTGTGGGCAAGGCAGCCCGGGGTCTGGCCAGAGCAAGCC
AGCCCTGATGGCTTATCTTCCCCAGCAGCTGTCCCATATAAGTCACGAGCAGAACTCCCTGTTTCTGATG
AAGCCAAAGCCAGGAAATATGCCTTTCCGATCACTGGTTCCACCTGGCCAGGAGCAGAACCCTTCCAGTG
TCCCTGTGCAAGCCCAGGCTACCAGTGTTGGGACCCAGCCGCCTGCCGTGTCCGTGGCCAGCTCCCACAA
CAGCTCCCCCTATCTCAGCAGCCAGCAACAGGCCGCTGTAATGAAGCAGCATCAGTTGCTTTTGGACCAA
CAGAAACAAAGGGAGCAGCAGCAAAAGCATTTACAGCAACAGCAGTTCCTTCAGAGGCAACAGCACCTTC
TCGCGGAACAGGAGAAGCAACAGTTTCAGCGCCATCTGACCCGCCCACCACCCCAGTACCAAGACCCGAC
ACAAGGCAGCTTCCCACAGCAGGTTGGACAGTTCACAGGGTCCTCTGCTGCCGTGCCCGGCATGAACACC
TTGGGTCCATCCAACTCCAGCTGTCCTCGAGTGTTCCCTCAGGCTGGGAATCTGATGCCAATGGGCCCTG
GACATGCTTCAGTTTCCTCTCTCCCCACAAACTCAGGCCAACAGGACCGGGGTGTGGCTCAGTTCCCTGG
CTCCCAAAACATGCCTCAGAGCAGCCTCTATGGCATGGCTTCTGGCATAACCCAGATAGTTGCCCAGCCC
CCGCCACAGGCCACCAATGGACATGCCCACATTCCACGGCAGACCAACGTGGGCCAGAACACCTCCGTCT
CAGCTGCCTATGGGCAGAACTCTCTGGGAAGCTCTGGCCTCTCCCAGCAGCACAATAAGGGGACCCTGAA
CCCTGGTTTAACAAAGCCACCGGTCCCAAGGGTGTCACCAGCCATGGGAGGCCAGAATTCCTCCTGGCAG
CATCAGGGAATGCCGAACCTCAGTGGCCAGACCCCAGGGAACAGCAACGTGAGTCCCTTCACTGCAGCCT
CCAGTTTCCACATGCAGCAGCAGGCCCACCTGAAAATGTCTAGCCCGCAATTCTCCCAGGCAGTGCCCAA
CAGGCCCATGGCTCCCATGAGCTCAGCAGCTGCCGTGGGGTCCTTGCTACCCCCAGTGAGTGCACAGCAG
AGGACCAGCGCCCCTGCCCCAGCACCACCCCCAACAGCCCCTCAGCAGGGCTTGCCTGGCCTGAGCCCAG
CAGGGCCTGAGCTGGGGGCCTTCAGCCAGAGCCCTGCCTCACAGATGGGCGGTCGGGCGGGGCTGCACTG
CACCCAGGCCTACCCTGTGCGGACCGCGGGCCAGGAGCTGCCTTTTGCCTATAGCGGGCAGCCAGGTGGC
AGTGGGCTCTCTAGTGTGGCTGGACACACCGATCTGATCGACTCCCTGCTGAAGAACAGGACTTCAGAGG
AGTGGATGAGTGATTTGGACGACCTGTTAGGGTCTCAGTAA

Translation (1016 aa):
MVLPTCPMAEFALPRHSAVMERLRRRIELCRRHHSTCEARYEAVSPERLELERQHTFALHQRCIQAKAKR
AGKHRQPPAATAPAPAAPAPRLDAADGPEHGRPATHLHDTVKRNLDSATSPQNGDQQNGYGDLFPGHKKT
RREAPLGVAISSNGLPPASPLGQSDKPSGADALQSSGKHSLGLDSLNKKRLADSSLHLNGGSNPSESFPL
SLNKELKQEPVEDLPCMITGTVGSISQSNLMPDLNLNEQEWKELIEELNRSVPDEDMKDLFNEDFEEKKD
PESSGSATQTPLAQDINIKTEFSPAAFEQEQLGSPQVRAGSAGQTFLGPSSAPVSTDSPSLGGSQTLFHT
SGQPRADNPSPNLMPASAQAQNAQRALAGVVLPSQGPGGASELSSAHQLQQIAAKQKREQMLQNPQQATP
APAPGQMSTWQQTGPSHSSLDVPYPMEKPASPSSYKQDFTNSKLLMMPSVNKSSPRPGGPYLQPSHVNLL
SHQPPSNLNQNSANNQGSVLDYGNTKPLSHYKADCGQGSPGSGQSKPALMAYLPQQLSHISHEQNSLFLM
KPKPGNMPFRSLVPPGQEQNPSSVPVQAQATSVGTQPPAVSVASSHNSSPYLSSQQQAAVMKQHQLLLDQ
QKQREQQQKHLQQQQFLQRQQHLLAEQEKQQFQRHLTRPPPQYQDPTQGSFPQQVGQFTGSSAAVPGMNT
LGPSNSSCPRVFPQAGNLMPMGPGHASVSSLPTNSGQQDRGVAQFPGSQNMPQSSLYGMASGITQIVAQP
PPQATNGHAHIPRQTNVGQNTSVSAAYGQNSLGSSGLSQQHNKGTLNPGLTKPPVPRVSPAMGGQNSSWQ
HQGMPNLSGQTPGNSNVSPFTAASSFHMQQQAHLKMSSPQFSQAVPNRPMAPMSSAAAVGSLLPPVSAQQ
RTSAPAPAPPPTAPQQGLPGLSPAGPELGAFSQSPASQMGGRAGLHCTQAYPVRTAGQELPFAYSGQPGG
SGLSSVAGHTDLIDSLLKNRTSEEWMSDLDDLLGSQ


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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