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Report for CCDS58657.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
58657.1 Public Homo sapiens 19 ZNF85 24 110 108 CCDS HistoryNCBI Gene:7639Re-query CCDS DB by CCDS ID:58657.1Re-query CCDS DB by GeneID:7639See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 11, NCBI annotation release 103, Ensembl annotation release 68

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 58657.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000300540.7 ENSP00000300540.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000300540.7Link to Ensembl Protein Viewer:ENSP00000300540.2Re-query CCDS DB by Nucleotide ID:ENST00000300540Re-query CCDS DB by Protein ID:ENSP00000300540
Original member Current member NCBI NM_001256172.2 NP_001243101.1 Accepted alive Link to Nucleotide Sequence:NM_001256172.2Link to Protein Sequence:NP_001243101.1Re-query CCDS DB by Nucleotide ID:NM_001256172Re-query CCDS DB by Protein ID:NP_001243101Link to BLAST:NP_001243101.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001243101.1 87 Q03923-3 87 100% 0 0

Chromosomal Locations for CCDS 58657.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 19 (NC_000019.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 20923401 20923403 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 20934024 20934150 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 20934949 20935047 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 20942801 20942835 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (264 nt):
ATGGGACCATTGACATTTAGGGATGTGGCCATAGAATTCTCTCTGAAGGAGTGGCAATGCCTGGACACTG
CACAGCGGAATTTATATAGAAATGTGATGTTAGAGAACTACAGAAACCTGGTCTTCCTGGGTATTACTGT
TTCTAAGCCAGACCTGATCACTTGTCTGGAGCAAGGGAAAGAGGCCTGGAGTATGAAGAGACATGAGATC
ATGGTGGCCAAACCCACAGAATCTTACTCTGTCACCCAGTCTGGAATGCAGTAG

Translation (87 aa):
MGPLTFRDVAIEFSLKEWQCLDTAQRNLYRNVMLENYRNLVFLGITVSKPDLITCLEQGKEAWSMKRHEI
MVAKPTESYSVTQSGMQ


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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