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Report for CCDS8763.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
8763.1 Public Homo sapiens 12 ZNF641 24 110 108 CCDS HistoryNCBI Gene:121274Re-query CCDS DB by CCDS ID:8763.1Re-query CCDS DB by GeneID:121274See the combined annotation on chromosome 12 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 8763.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000301042.7 ENSP00000301042.3 Accepted alive Link to Ensembl Transcript Viewer:ENST00000301042.7Link to Ensembl Protein Viewer:ENSP00000301042.3Re-query CCDS DB by Nucleotide ID:ENST00000301042Re-query CCDS DB by Protein ID:ENSP00000301042
Original member Current member EBI ENST00000544117.6 ENSP00000437832.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000544117.6Link to Ensembl Protein Viewer:ENSP00000437832.2Re-query CCDS DB by Nucleotide ID:ENST00000544117Re-query CCDS DB by Protein ID:ENSP00000437832
Original member Current member NCBI NM_152320.3 NP_689533.2 Accepted alive Link to Nucleotide Sequence:NM_152320.3Link to Protein Sequence:NP_689533.2Re-query CCDS DB by Nucleotide ID:NM_152320Re-query CCDS DB by Protein ID:NP_689533Link to BLAST:NP_689533.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_689533.2 438 Q96N77-1 438 100% 0 0

Chromosomal Locations for CCDS 8763.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 12 (NC_000012.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12See the combined annotation on chromosome 12 in Sequence Viewer

Chromosome Start Stop Links
12 48342973 48343727 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 48344599 48344712 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 48345345 48345474 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 48347252 48347343 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 48347907 48348115 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 48350046 48350062 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1317 nt):
ATGCAAGCTGAGGACAGGTCACAATTTGGGTCTGCAGCAGAAATGCTTTCAGAACAGACAGCAGCGCTGG
GGACAGGATGGGAATCAATGAATGTACAGCTGGATGGAGCAGAGCCCCAGGTGGAAAGGGGAAGCCAGGA
AGAGCGGCCATGGAGAACAGTACCAGGACCTCTGGAGCACCTGTGCTGTGACCTTGAAGAGGAGCCACAG
TCCCTTCAGGAGAAGGCTCAGTCTGCTCCCTGGGTTCCTGCAATTCCCCAGGAGGGGAACACTGGAGACT
GGGAGATGGCAGCTGCACTTCTTGCGGCTGGATCACAGGGCCTGGTAACCATCAAGGATGTGTCACTGTG
CTTCTCTCAGGAGGAGTGGCGGAGCCTGGACCCCTCTCAGACAGACTTTTATGGAGAATATGTCATGCAG
GAAAACTGTGGGATAGTAGTCTCTCTGAGATTTCCAATTCCCAAACTGGACATGCTTTCTCAACTAGAAG
GAGGAGAAGAACAATGGGTCCCTGACCCCCAGGACTTAGAGGAGAGGGACATTCTGAGGGTCACATATAC
AGGAGATGGAAGTGAACATGAGGGGGATACCCCTGAACTAGAAGCAGAACCTCCCAGAATGTTATCCAGC
GTGTCTGAAGATACTGTTCTCTGGAACCCGGAGCATGATGAGAGCTGGGATTCCATGCCCAGCAGCTCCA
GAGGAATGCTCCTGGGGCCCCCTTTTCTTCAGGAAGATAGTTTCTCAAACCTGCTGTGTAGCACAGAGAT
GGATTCCCTGTTAAGACCCCACACATGCCCCCAGTGTGGGAAACAGTTTGTATGGGGTTCCCACCTTGCC
AGGCATCAACAAACACACACTGGGGAGAGACCCTACAGCTGCCTCAAGTGTGAGAAGACCTTTGGGCGAA
GACATCACCTCATCAGGCACCAGAAAACCCACCTACATGACAAGACCAGCAGGTGCTCTGAGTGTGGTAA
GAATTTCCGATGCAACTCCCATCTGGCCAGCCACCAGAGAGTGCATGCAGAAGGCAAATCCTGCAAAGGC
CAAGAGGTTGGAGAGAGCCCTGGCACAAGGAAACGGCAGCGTGCCCCACCAGTGCCAAAGTGTCACGTGT
GCACTGAATGTGGGAAGAGCTTTGGCCGAAGGCACCACCTTGTGAGACACTGGCTGACCCACACTGGGGA
GAAGCCCTTCCAGTGCCCTCGCTGTGAGAAGAGCTTTGGCCGAAAACATCACCTGGACAGGCACCTGCTC
ACCCACCAGGGACAAAGTCCCCGGAACAGCTGGGACAGAGGAACATCTGTCTTTTGA

Translation (438 aa):
MQAEDRSQFGSAAEMLSEQTAALGTGWESMNVQLDGAEPQVERGSQEERPWRTVPGPLEHLCCDLEEEPQ
SLQEKAQSAPWVPAIPQEGNTGDWEMAAALLAAGSQGLVTIKDVSLCFSQEEWRSLDPSQTDFYGEYVMQ
ENCGIVVSLRFPIPKLDMLSQLEGGEEQWVPDPQDLEERDILRVTYTGDGSEHEGDTPELEAEPPRMLSS
VSEDTVLWNPEHDESWDSMPSSSRGMLLGPPFLQEDSFSNLLCSTEMDSLLRPHTCPQCGKQFVWGSHLA
RHQQTHTGERPYSCLKCEKTFGRRHHLIRHQKTHLHDKTSRCSECGKNFRCNSHLASHQRVHAEGKSCKG
QEVGESPGTRKRQRAPPVPKCHVCTECGKSFGRRHHLVRHWLTHTGEKPFQCPRCEKSFGRKHHLDRHLL
THQGQSPRNSWDRGTSVF


Links Key
 Links to:   History report
  BLAST report
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  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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