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Report for CCDS11044.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
11044.1 Public Homo sapiens 17 CYB5D2 24 110 108 CCDS HistoryNCBI Gene:124936Re-query CCDS DB by CCDS ID:11044.1Re-query CCDS DB by GeneID:124936See the combined annotation on chromosome 17 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 11044.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000301391.8 ENSP00000301391.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000301391.8Link to Ensembl Protein Viewer:ENSP00000301391.4Re-query CCDS DB by Nucleotide ID:ENST00000301391Re-query CCDS DB by Protein ID:ENSP00000301391
Original member Current member NCBI NM_144611.4 NP_653212.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_144611.4Link to Protein Sequence:NP_653212.1Re-query CCDS DB by Nucleotide ID:NM_144611Re-query CCDS DB by Protein ID:NP_653212Link to BLAST:NP_653212.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_653212.1 264 Q8WUJ1-1 264 100% 0 0

Chromosomal Locations for CCDS 11044.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 17 (NC_000017.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17See the combined annotation on chromosome 17 in Sequence Viewer

Chromosome Start Stop Links
17 4143756 4144005 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 4149891 4150031 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 4154674 4154860 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 4156866 4157082 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (795 nt):
ATGTTGAGGTGCGGAGGCCGTGGGCTTTTGTTGGGCCTGGCTGTAGCCGCAGCAGCGGTAATGGCAGCAC
GGCTTATGGGCTGGTGGGGTCCCCGCGCTGGCTTTCGCCTTTTCATACCGGAGGAGCTGTCTCGCTACCG
CGGCGGCCCAGGGGACCCGGGCCTGTACTTGGCGTTGCTCGGCCGTGTCTACGATGTGTCCTCCGGCCGG
AGGCACTACGAGCCTGGGTCCCACTATAGCGGCTTCGCAGGCCGAGACGCATCCAGAGCTTTCGTGACCG
GGGACTGTTCTGAAGCAGGCCTCGTGGATGACGTATCCGACCTGTCAGCCGCTGAGATGCTGACACTTCA
CAATTGGCTTTCATTCTATGAGAAGAATTATGTGTGTGTTGGGAGGGTGACAGGACGGTTCTACGGAGAG
GATGGGCTGCCCACCCCGGCACTGACCCAGGTAGAAGCTGCGATCACCAGAGGCTTGGAGGCCAACAAAC
TACAGCTGCAAGAGAAGCAGACATTCCCGCCGTGCAACGCGGAGTGGAGCTCAGCCAGGGGCAGCCGGCT
CTGGTGCTCCCAGAAGAGTGGAGGTGTGAGCAGAGACTGGATTGGCGTCCCCAGGAAGCTGTATAAGCCA
GGTGCTAAGGAGCCCCGCTGCGTGTGTGTGAGAACCACCGGCCCCCCTAGTGGCCAGATGCCGGACAACC
CTCCACACAGAAATCGTGGGGACCTGGACCACCCAAACTTGGCAGAGTACACAGGCTGCCCACCGCTAGC
CATCACATGCTCCTTTCCACTCTAA

Translation (264 aa):
MLRCGGRGLLLGLAVAAAAVMAARLMGWWGPRAGFRLFIPEELSRYRGGPGDPGLYLALLGRVYDVSSGR
RHYEPGSHYSGFAGRDASRAFVTGDCSEAGLVDDVSDLSAAEMLTLHNWLSFYEKNYVCVGRVTGRFYGE
DGLPTPALTQVEAAITRGLEANKLQLQEKQTFPPCNAEWSSARGSRLWCSQKSGGVSRDWIGVPRKLYKP
GAKEPRCVCVRTTGPPSGQMPDNPPHRNRGDLDHPNLAEYTGCPPLAITCSFPL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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