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Report for CCDS12839.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
12839.1 Public Homo sapiens 19 FPR1 24 110 108 CCDS HistoryNCBI Gene:2357Re-query CCDS DB by CCDS ID:12839.1Re-query CCDS DB by GeneID:2357See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 12839.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000304748.5 ENSP00000302707.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000304748.5Link to Ensembl Protein Viewer:ENSP00000302707.3Re-query CCDS DB by Nucleotide ID:ENST00000304748Re-query CCDS DB by Protein ID:ENSP00000302707
Original member Current member EBI ENST00000594900.2 ENSP00000470750.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000594900.2Link to Ensembl Protein Viewer:ENSP00000470750.2Re-query CCDS DB by Nucleotide ID:ENST00000594900Re-query CCDS DB by Protein ID:ENSP00000470750
Original member Current member EBI ENST00000595042.5 ENSP00000471493.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000595042.5Link to Ensembl Protein Viewer:ENSP00000471493.1Re-query CCDS DB by Nucleotide ID:ENST00000595042Re-query CCDS DB by Protein ID:ENSP00000471493
Original member Current member EBI ENST00000600815.2 ENSP00000472936.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000600815.2Link to Ensembl Protein Viewer:ENSP00000472936.2Re-query CCDS DB by Nucleotide ID:ENST00000600815Re-query CCDS DB by Protein ID:ENSP00000472936
Original member Current member NCBI NM_001193306.2 NP_001180235.1 Accepted alive Link to Nucleotide Sequence:NM_001193306.2Link to Protein Sequence:NP_001180235.1Re-query CCDS DB by Nucleotide ID:NM_001193306Re-query CCDS DB by Protein ID:NP_001180235Link to BLAST:NP_001180235.1
Original member Current member NCBI NM_002029.4 NP_002020.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_002029.4Link to Protein Sequence:NP_002020.1Re-query CCDS DB by Nucleotide ID:NM_002029Re-query CCDS DB by Protein ID:NP_002020Link to BLAST:NP_002020.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001180235.1 350 P21462 350 100% 0 0
NP_002020.1 350 P21462 350 100% 0 0

Chromosomal Locations for CCDS 12839.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 19 (NC_000019.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 51745942 51746994 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1053 nt):
ATGGAGACAAATTCCTCTCTCCCCACGAACATCTCTGGAGGGACACCTGCTGTATCTGCTGGCTATCTCT
TCCTGGATATCATCACTTATCTGGTATTTGCAGTCACCTTTGTCCTCGGGGTCCTGGGCAACGGGCTTGT
GATCTGGGTGGCTGGATTCCGGATGACACACACAGTCACCACCATCAGTTACCTGAACCTGGCCGTGGCT
GACTTCTGTTTCACCTCCACTTTGCCATTCTTCATGGTCAGGAAGGCCATGGGAGGACATTGGCCTTTCG
GCTGGTTCCTGTGCAAATTCGTCTTTACCATAGTGGACATCAACTTGTTCGGAAGTGTCTTCCTGATCGC
CCTCATTGCTCTGGACCGCTGTGTTTGCGTCCTGCATCCAGTCTGGACCCAGAACCACCGCACCGTGAGC
CTGGCCAAGAAGGTGATCATTGGGCCCTGGGTGATGGCTCTGCTCCTCACATTGCCAGTTATCATTCGTG
TGACTACAGTACCTGGTAAAACGGGGACAGTAGCCTGCACTTTTAACTTTTCGCCCTGGACCAACGACCC
TAAAGAGAGGATAAATGTGGCCGTTGCCATGTTGACGGTGAGAGGCATCATCCGGTTCATCATTGGCTTC
AGCGCACCCATGTCCATCGTTGCTGTCAGTTATGGGCTTATTGCCACCAAGATCCACAAGCAAGGCTTGA
TTAAGTCCAGTCGTCCCTTACGGGTCCTCTCCTTTGTCGCAGCAGCCTTTTTTCTCTGCTGGTCCCCATA
TCAGGTGGTGGCCCTTATAGCCACAGTCAGAATCCGTGAGTTATTGCAAGGCATGTACAAAGAAATTGGT
ATTGCAGTGGATGTGACAAGTGCCCTGGCCTTCTTCAACAGCTGCCTCAACCCCATGCTCTATGTCTTCA
TGGGCCAGGACTTCCGGGAGAGGCTGATCCACGCCCTTCCCGCCAGTCTGGAGAGGGCCCTGACCGAGGA
CTCAACCCAAACCAGTGACACAGCTACCAATTCTACTTTACCTTCTGCAGAGGTGGAGTTACAGGCAAAG
TGA

Translation (350 aa):
METNSSLPTNISGGTPAVSAGYLFLDIITYLVFAVTFVLGVLGNGLVIWVAGFRMTHTVTTISYLNLAVA
DFCFTSTLPFFMVRKAMGGHWPFGWFLCKFVFTIVDINLFGSVFLIALIALDRCVCVLHPVWTQNHRTVS
LAKKVIIGPWVMALLLTLPVIIRVTTVPGKTGTVACTFNFSPWTNDPKERINVAVAMLTVRGIIRFIIGF
SAPMSIVAVSYGLIATKIHKQGLIKSSRPLRVLSFVAAAFFLCWSPYQVVALIATVRIRELLQGMYKEIG
IAVDVTSALAFFNSCLNPMLYVFMGQDFRERLIHALPASLERALTEDSTQTSDTATNSTLPSAEVELQAK


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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