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Report for CCDS12099.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
12099.1 Public Homo sapiens 19 ZNF77 24 110 108 CCDS HistoryNCBI Gene:58492Re-query CCDS DB by CCDS ID:12099.1Re-query CCDS DB by GeneID:58492See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 12099.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000314531.5 ENSP00000319053.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000314531.5Link to Ensembl Protein Viewer:ENSP00000319053.3Re-query CCDS DB by Nucleotide ID:ENST00000314531Re-query CCDS DB by Protein ID:ENSP00000319053
Original member Current member NCBI NM_021217.3 NP_067040.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_021217.3Link to Protein Sequence:NP_067040.1Re-query CCDS DB by Nucleotide ID:NM_021217Re-query CCDS DB by Protein ID:NP_067040Link to BLAST:NP_067040.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_067040.1 545 Q15935 545 100% 0 0

Chromosomal Locations for CCDS 12099.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 19 (NC_000019.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 2933489 2934815 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 2936524 2936704 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 2939281 2939407 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 2944838 2944840 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1638 nt):
ATGGACTGCGTGATCTTTGAGGAAGTGGCTGTGAACTTCACCCCAGAAGAGTGGGCATTGCTGGATCATG
CTCAGAGGAGCCTCTACAGAGATGTGATGCTGGAGACCTGCAGGAACCTTGCCTCCTTGGATTGTTACAT
TTATGTTAGAACCAGTGGATCAAGTTCTCAGAGGGACGTTTTTGGGAATGGAATATCCAATGATGAAGAG
ATTGTAAAGTTCACAGGAAGTGATTCCTGGTCTATTTTTGGAGAAAATTGGAGATTTGATAACACTGGAG
ATCAGCACCAAATCCCACAGAGGCATCTGAGAAGTCAGCTGGGGAGACTCTGTGAAAGTAATGAAGGTCA
TCAATGCGGAGAGACCTTGAGCCAGACTGCGAACCTTCTTGTGCACAAGAGTTACCCTACCGAAGCTAAA
CCCTCTGAGTGCACTAAGTGTGGCAAAGCCTTCGAGAATCGGCAGAGATCTCACACTGGACAGAGACCGT
GTAAGGAATGTGGGCAAGCCTGCAGCTGCCTCTCCTGCCAAAGCCCTCCTATGAAAACGCAGACTGTAGA
GAAACCCTGTAATTGCCAGGACTCAAGGACAGCATCTGTGACATACGTGAAAAGTCTCAGCAGTAAAAAG
TCTTATGAATGTCAGAAATGTGGAAAAGCTTTCATTTGTCCCTCATCTTTCAGGGGACATGTGAATAGTC
ATCATGGGCAGAAAACCCATGCATGTAAAGTATGTGGGAAGACCTTTATGTATTACTCCTACCTTACACG
GCACGTAAGAACTCACACAGGAGAGAAACCCTATGAGTGTAAGGAGTGTGGGAAAGCCTTCAGCTGTCCC
TCATACTTTCGAGAACATGTCAGAACACACACTGGAGAGAAACCGTATGAATGTAAGCATTGTGGAAAAT
CATTCAGCTGTTACTCCTCCTTTAGAGATCACGTGAGGACGCACACTGGAGAGAAACCCTGTCAGTGTAA
ACATTGCGGAAAAGCGTTCACTTGTTACTCGTCTCTTCGAGAACATGGGAGAACGCACAGTGGAGAGAAA
CCCTATGAATGTAAGGAATGCGGCAAAGCCTTCAGGTACCCCTCCTCTCTGCGAGCACACATGAGAATGC
ACACCGGAGAGAAGCCCTATGTGTGCAAGCAGTGTGGGAAGGCCTTCGGATGTCCCACTTACTTTAGAAG
ACATGTGAAAACACACAGCGGGGTGAAGCCCTATCAATGTAAAGAGTGTGGGAAAGCCTACAGTTTTTCC
TCCTCCCTTCGAATCCACGTGAGGACGCATACTGGAGAGAAGCCCTTTGAGTGTAAGCATTGTGGGAAAG
CCTTCAGCTGTCACTCCTCCCTTCGAGAGCATGTGCGAACCCACAGCGGAGAGAAACCGTACGAATGTAA
TCAATGTGGGAAAGCCTTCAGCCACGCTCAGTACTTTCAAAAGCATGTGAGATCACACAGTGGGGTCAAA
CCCTACGAATGTACTGAATGTGGGAAAGCCTACAGTTGTTCCTCGTCCCTTCGTGTGCACGTGAGAACGC
ACACTGGAGAGAGACCGTATGAATGCAAGCAGTGTGGGAAAACCTTCAGGTATCTCGCATCGCTTCAAGC
ACATGTGAGAACACATGCTGGAGCGTGA

Translation (545 aa):
MDCVIFEEVAVNFTPEEWALLDHAQRSLYRDVMLETCRNLASLDCYIYVRTSGSSSQRDVFGNGISNDEE
IVKFTGSDSWSIFGENWRFDNTGDQHQIPQRHLRSQLGRLCESNEGHQCGETLSQTANLLVHKSYPTEAK
PSECTKCGKAFENRQRSHTGQRPCKECGQACSCLSCQSPPMKTQTVEKPCNCQDSRTASVTYVKSLSSKK
SYECQKCGKAFICPSSFRGHVNSHHGQKTHACKVCGKTFMYYSYLTRHVRTHTGEKPYECKECGKAFSCP
SYFREHVRTHTGEKPYECKHCGKSFSCYSSFRDHVRTHTGEKPCQCKHCGKAFTCYSSLREHGRTHSGEK
PYECKECGKAFRYPSSLRAHMRMHTGEKPYVCKQCGKAFGCPTYFRRHVKTHSGVKPYQCKECGKAYSFS
SSLRIHVRTHTGEKPFECKHCGKAFSCHSSLREHVRTHSGEKPYECNQCGKAFSHAQYFQKHVRSHSGVK
PYECTECGKAYSCSSSLRVHVRTHTGERPYECKQCGKTFRYLASLQAHVRTHAGA


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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