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Report for CCDS9928.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
9928.1 Public Homo sapiens 14 SERPINA5 24 110 108 CCDS HistoryNCBI Gene:5104Re-query CCDS DB by CCDS ID:9928.1Re-query CCDS DB by GeneID:5104See the combined annotation on chromosome 14 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 9928.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000329597.12 ENSP00000333203.7 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000329597.12Link to Ensembl Protein Viewer:ENSP00000333203.7Re-query CCDS DB by Nucleotide ID:ENST00000329597Re-query CCDS DB by Protein ID:ENSP00000333203
Original member Current member EBI ENST00000553780.5 ENSP00000450837.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000553780.5Link to Ensembl Protein Viewer:ENSP00000450837.1Re-query CCDS DB by Nucleotide ID:ENST00000553780Re-query CCDS DB by Protein ID:ENSP00000450837
Original member Current member EBI ENST00000554866.5 ENSP00000451126.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000554866.5Link to Ensembl Protein Viewer:ENSP00000451126.1Re-query CCDS DB by Nucleotide ID:ENST00000554866Re-query CCDS DB by Protein ID:ENSP00000451126
Original member Current member EBI ENST00000554276.1 ENSP00000451610.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000554276.1Link to Ensembl Protein Viewer:ENSP00000451610.1Re-query CCDS DB by Nucleotide ID:ENST00000554276Re-query CCDS DB by Protein ID:ENSP00000451610
Original member Current member NCBI NM_000624.6 NP_000615.3 MANE Select Accepted alive Link to Nucleotide Sequence:NM_000624.6Link to Protein Sequence:NP_000615.3Re-query CCDS DB by Nucleotide ID:NM_000624Re-query CCDS DB by Protein ID:NP_000615Link to BLAST:NP_000615.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_000615.3 406 P05154 406 100% 0 0

Chromosomal Locations for CCDS 9928.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 14 (NC_000014.9)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14See the combined annotation on chromosome 14 in Sequence Viewer

Chromosome Start Stop Links
14 94587363 94587981 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 94590041 94590311 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 94590749 94590896 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 94592057 94592239 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1221 nt):
ATGCAGCTCTTCCTCCTCTTGTGCCTGGTGCTTCTCAGCCCTCAGGGGGCCTCCCTTCACCGCCACCACC
CCCGGGAGATGAAGAAGAGAGTCGAGGACCTCCATGTAGGTGCCACGGTGGCCCCCAGCAGCAGAAGGGA
CTTTACCTTTGACCTCTACAGGGCCTTGGCTTCCGCTGCCCCCAGCCAGAGCATCTTCTTCTCCCCTGTG
AGCATCTCCATGAGCCTGGCCATGCTCTCCCTGGGGGCTGGGTCCAGCACAAAGATGCAGATCCTGGAGG
GCCTGGGCCTCAACCTCCAGAAAAGCTCAGAGAAGGAGCTGCACAGAGGCTTTCAGCAGCTCCTTCAGGA
ACTCAACCAGCCCAGAGATGGCTTCCAGCTGAGCCTCGGCAATGCCCTTTTCACCGACCTGGTGGTAGAC
CTGCAGGACACCTTCGTAAGTGCCATGAAGACGCTGTACCTGGCAGACACTTTCCCTACCAACTTTAGGG
ACTCTGCAGGGGCCATGAAGCAGATCAATGATTATGTGGCAAAGCAAACGAAGGGCAAGATTGTGGACTT
GCTTAAGAACCTCGATAGCAATGCGGTCGTGATCATGGTGAATTACATCTTCTTTAAAGCTAAGTGGGAG
ACAAGCTTCAACCACAAAGGCACCCAAGAGCAAGACTTCTACGTGACCTCGGAGACTGTGGTGCGGGTAC
CCATGATGAGCCGCGAGGATCAGTATCACTACCTCCTGGACCGGAACCTCTCCTGCAGGGTGGTGGGGGT
CCCCTACCAAGGCAATGCCACGGCTTTGTTCATTCTCCCCAGTGAGGGAAAGATGCAGCAGGTGGAGAAT
GGACTGAGTGAGAAAACGCTGAGGAAGTGGCTTAAGATGTTCAAAAAGAGGCAGCTCGAGCTTTACCTTC
CCAAATTCTCCATTGAGGGCTCCTATCAGCTGGAGAAAGTCCTCCCCAGTCTGGGGATCAGTAACGTCTT
CACCTCCCATGCTGATCTGTCCGGCATCAGCAACCACTCAAATATCCAGGTGTCTGAGATGGTGCACAAA
GCTGTGGTGGAGGTGGACGAGTCGGGAACCAGAGCAGCGGCAGCCACGGGGACAATATTCACTTTCAGGT
CGGCCCGCCTGAACTCTCAGAGGCTAGTGTTCAACAGGCCCTTTCTGATGTTCATTGTGGATAACAACAT
CCTCTTCCTTGGCAAAGTGAACCGCCCCTGA

Translation (406 aa):
MQLFLLLCLVLLSPQGASLHRHHPREMKKRVEDLHVGATVAPSSRRDFTFDLYRALASAAPSQSIFFSPV
SISMSLAMLSLGAGSSTKMQILEGLGLNLQKSSEKELHRGFQQLLQELNQPRDGFQLSLGNALFTDLVVD
LQDTFVSAMKTLYLADTFPTNFRDSAGAMKQINDYVAKQTKGKIVDLLKNLDSNAVVIMVNYIFFKAKWE
TSFNHKGTQEQDFYVTSETVVRVPMMSREDQYHYLLDRNLSCRVVGVPYQGNATALFILPSEGKMQQVEN
GLSEKTLRKWLKMFKKRQLELYLPKFSIEGSYQLEKVLPSLGISNVFTSHADLSGISNHSNIQVSEMVHK
AVVEVDESGTRAAAATGTIFTFRSARLNSQRLVFNRPFLMFIVDNNILFLGKVNRP


Links Key
 Links to:   History report
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  Nucleotide report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
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