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Report for CCDS8053.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
8053.1 Public Homo sapiens 11 NAA40 24 110 108 CCDS HistoryNCBI Gene:79829Re-query CCDS DB by CCDS ID:8053.1Re-query CCDS DB by GeneID:79829See the combined annotation on chromosome 11 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 8053.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000377793.9 ENSP00000367024.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000377793.9Link to Ensembl Protein Viewer:ENSP00000367024.4Re-query CCDS DB by Nucleotide ID:ENST00000377793Re-query CCDS DB by Protein ID:ENSP00000367024
Original member Current member NCBI NM_024771.4 NP_079047.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_024771.4Link to Protein Sequence:NP_079047.2Re-query CCDS DB by Nucleotide ID:NM_024771Re-query CCDS DB by Protein ID:NP_079047Link to BLAST:NP_079047.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_079047.2 237 Q86UY6-1 237 100% 0 0

Chromosomal Locations for CCDS 8053.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 11 (NC_000011.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11See the combined annotation on chromosome 11 in Sequence Viewer

Chromosome Start Stop Links
11 63939097 63939102 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 63945840 63945935 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 63946951 63947003 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 63952238 63952333 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 63952407 63952565 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 63952756 63952839 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 63953972 63954049 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 63954338 63954479 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (714 nt):
ATGGGGAGAAAGTCAAGCAAAGCCAAGGAGAAGAAGCAGAAGCGGTTGGAGGAGCGAGCAGCCATGGATG
CCGTTTGTGCCAAAGTGGACGCTGCCAACAGGCTTGGAGACCCTCTGGAGGCTTTCCCAGTGTTCAAGAA
ATATGATAGAAACGGGTTGAATGTCTCCATTGAATGTAAGCGAGTGTCTGGACTGGAGCCAGCCACCGTG
GATTGGGCCTTCGACCTGACCAAAACGAATATGCAAACCATGTATGAGCAGAGCGAGTGGGGCTGGAAGG
ACCGAGAGAAACGGGAGGAAATGACAGATGACCGAGCCTGGTACCTCATCGCGTGGGAAAACAGCTCCGT
CCCTGTTGCCTTTTCTCACTTCCGGTTTGACGTGGAGTGTGGGGATGAAGTCCTGTACTGCTATGAAGTG
CAGTTGGAAAGCAAGGTGCGGCGGAAAGGCCTGGGGAAGTTCCTCATACAGATCCTGCAGCTCATGGCCA
ACAGCACACAGATGAAGAAGGTTATGTTAACAGTATTTAAACACAATCATGGTGCCTACCAGTTCTTCAG
AGAAGCGTTGCAATTTGAAATTGATGACTCTTCCCCCAGCATGTCCGGTTGCTGTGGGGAGGATTGCTCC
TATGAGATCCTGAGCCGGAGGACCAAGTTTGGGGACAGCCATCACTCCCACGCGGGTGGGCACTGTGGTG
GCTGCTGCCACTGA

Translation (237 aa):
MGRKSSKAKEKKQKRLEERAAMDAVCAKVDAANRLGDPLEAFPVFKKYDRNGLNVSIECKRVSGLEPATV
DWAFDLTKTNMQTMYEQSEWGWKDREKREEMTDDRAWYLIAWENSSVPVAFSHFRFDVECGDEVLYCYEV
QLESKVRRKGLGKFLIQILQLMANSTQMKKVMLTVFKHNHGAYQFFREALQFEIDDSSPSMSGCCGEDCS
YEILSRRTKFGDSHHSHAGGHCGGCCH


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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