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Report for CCDS14222.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
14222.1 Public Homo sapiens X MAGEB1 24 110 108 CCDS HistoryNCBI Gene:4112Re-query CCDS DB by CCDS ID:14222.1Re-query CCDS DB by GeneID:4112See the combined annotation on chromosome X in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 14222.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000378981.8 ENSP00000368264.3 Accepted alive Link to Ensembl Transcript Viewer:ENST00000378981.8Link to Ensembl Protein Viewer:ENSP00000368264.3Re-query CCDS DB by Nucleotide ID:ENST00000378981Re-query CCDS DB by Protein ID:ENSP00000368264
Original member Current member EBI ENST00000397548.4 ENSP00000380681.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000397548.4Link to Ensembl Protein Viewer:ENSP00000380681.2Re-query CCDS DB by Nucleotide ID:ENST00000397548Re-query CCDS DB by Protein ID:ENSP00000380681
Original member Current member EBI ENST00000397550.6 ENSP00000380683.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000397550.6Link to Ensembl Protein Viewer:ENSP00000380683.1Re-query CCDS DB by Nucleotide ID:ENST00000397550Re-query CCDS DB by Protein ID:ENSP00000380683
Original member Current member NCBI NM_002363.5 NP_002354.2 Accepted alive Link to Nucleotide Sequence:NM_002363.5Link to Protein Sequence:NP_002354.2Re-query CCDS DB by Nucleotide ID:NM_002363Re-query CCDS DB by Protein ID:NP_002354Link to BLAST:NP_002354.2
Original member Current member NCBI NM_177404.3 NP_796379.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_177404.3Link to Protein Sequence:NP_796379.1Re-query CCDS DB by Nucleotide ID:NM_177404Re-query CCDS DB by Protein ID:NP_796379Link to BLAST:NP_796379.1
Original member Current member NCBI NM_177415.3 NP_803134.1 Accepted alive Link to Nucleotide Sequence:NM_177415.3Link to Protein Sequence:NP_803134.1Re-query CCDS DB by Nucleotide ID:NM_177415Re-query CCDS DB by Protein ID:NP_803134Link to BLAST:NP_803134.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_002354.2 347 P43366 347 100% 0 0
NP_796379.1 347 P43366 347 100% 0 0
NP_803134.1 347 P43366 347 100% 0 0

Chromosomal Locations for CCDS 14222.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome X (NC_000023.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome XSee the combined annotation on chromosome X in Sequence Viewer

Chromosome Start Stop Links
X 30250494 30251537 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1044 nt):
ATGCCTCGGGGTCAGAAGAGTAAGCTCCGTGCTCGTGAGAAACGCCGCAAGGCGCGAGAGGAGACCCAGG
GTCTCAAGGTTGCTCACGCCACTGCAGCAGAGAAAGAGGAGTGCCCCTCCTCCTCTCCTGTTTTAGGGGA
TACTCCCACAAGCTCCCCTGCTGCTGGCATTCCCCAGAAGCCTCAGGGAGCTCCACCCACCACCACTGCT
GCTGCAGCTGTGTCATGTACCGAATCTGACGAAGGTGCCAAATGCCAAGGTGAGGAAAATGCAAGTTTCT
CCCAGGCCACAACATCCACTGAGAGCTCAGTCAAAGATCCTGTAGCCTGGGAGGCAGGAATGCTGATGCA
CTTCATTCTACGTAAGTATAAAATGAGAGAGCCCATTATGAAGGCAGATATGCTGAAGGTTGTTGATGAA
AAGTACAAGGATCACTTCACTGAGATCCTCAATGGAGCCTCTCGCCGCTTGGAGCTCGTCTTTGGCCTTG
ATTTGAAGGAAGACAACCCTAGTGGCCACACCTACACCCTCGTCAGTAAGCTAAACCTCACCAATGATGG
AAACCTGAGCAATGATTGGGACTTTCCCAGGAATGGGCTTCTGATGCCTCTCCTGGGTGTGATCTTCTTA
AAGGGCAACTCTGCCACCGAGGAAGAGATCTGGAAATTCATGAATGTGTTGGGAGCCTATGATGGAGAGG
AGCACTTAATCTATGGGGAACCCCGTAAGTTCATCACCCAAGATCTGGTGCAGGAAAAATATCTGAAGTA
CGAGCAGGTGCCCAACAGTGATCCCCCACGCTATCAATTCCTATGGGGTCCGAGAGCCTATGCTGAAACC
ACCAAGATGAAAGTCCTCGAGTTTTTGGCCAAGATGAATGGTGCCACTCCCCGTGACTTCCCATCCCATT
ATGAAGAGGCTTTGAGAGATGAGGAAGAGAGAGCCCAAGTCCGATCCAGTGTTAGAGCCAGGCGTCGCAC
TACTGCCACGACTTTTAGAGCGCGTTCTAGAGCCCCATTCAGCAGGTCCTCCCACCCCATGTGA

Translation (347 aa):
MPRGQKSKLRAREKRRKAREETQGLKVAHATAAEKEECPSSSPVLGDTPTSSPAAGIPQKPQGAPPTTTA
AAAVSCTESDEGAKCQGEENASFSQATTSTESSVKDPVAWEAGMLMHFILRKYKMREPIMKADMLKVVDE
KYKDHFTEILNGASRRLELVFGLDLKEDNPSGHTYTLVSKLNLTNDGNLSNDWDFPRNGLLMPLLGVIFL
KGNSATEEEIWKFMNVLGAYDGEEHLIYGEPRKFITQDLVQEKYLKYEQVPNSDPPRYQFLWGPRAYAET
TKMKVLEFLAKMNGATPRDFPSHYEEALRDEEERAQVRSSVRARRRTTATTFRARSRAPFSRSSHPM


Links Key
 Links to:   History report
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  Nucleotide report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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