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Report for CCDS10482.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
10482.1 Public Homo sapiens 16 FLYWCH2 24 110 108 CCDS HistoryNCBI Gene:114984Re-query CCDS DB by CCDS ID:10482.1Re-query CCDS DB by GeneID:114984See the combined annotation on chromosome 16 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 10482.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000293981.10 ENSP00000293981.6 Accepted alive Link to Ensembl Transcript Viewer:ENST00000293981.10Link to Ensembl Protein Viewer:ENSP00000293981.6Re-query CCDS DB by Nucleotide ID:ENST00000293981Re-query CCDS DB by Protein ID:ENSP00000293981
Original member Current member EBI ENST00000396958.8 ENSP00000380159.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000396958.8Link to Ensembl Protein Viewer:ENSP00000380159.3Re-query CCDS DB by Nucleotide ID:ENST00000396958Re-query CCDS DB by Protein ID:ENSP00000380159
Original member Current member NCBI NM_001142499.1 NP_001135971.1 Accepted alive Link to Nucleotide Sequence:NM_001142499.1Link to Protein Sequence:NP_001135971.1Re-query CCDS DB by Nucleotide ID:NM_001142499Re-query CCDS DB by Protein ID:NP_001135971Link to BLAST:NP_001135971.1
Original member Current member NCBI NM_001142500.1 NP_001135972.1 Accepted alive Link to Nucleotide Sequence:NM_001142500.1Link to Protein Sequence:NP_001135972.1Re-query CCDS DB by Nucleotide ID:NM_001142500Re-query CCDS DB by Protein ID:NP_001135972Link to BLAST:NP_001135972.1
Original member Current member NCBI NM_138439.3 NP_612448.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_138439.3Link to Protein Sequence:NP_612448.1Re-query CCDS DB by Nucleotide ID:NM_138439Re-query CCDS DB by Protein ID:NP_612448Link to BLAST:NP_612448.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001135971.1 140 Q96CP2 140 100% 0 0
NP_001135972.1 140 Q96CP2 140 100% 0 0
NP_612448.1 140 Q96CP2 140 100% 0 0

Chromosomal Locations for CCDS 10482.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 16 (NC_000016.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16See the combined annotation on chromosome 16 in Sequence Viewer

Chromosome Start Stop Links
16 2896450 2896771 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 2899049 2899149 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (423 nt):
ATGCCCCTGCCCGAGCCCAGCGAGCAGGAGGGTGAGAGTGTGAAGGCCAGCCAGGAGCCATCCCCCAAGC
CAGGCACAGAAGTCATCCCGGCAGCCCCCAGGAAGCCCAGAAAGTTCTCCAAACTGGTCCTGCTCACAGC
CTCCAAAGACAGCACCAAGGTGGCGGGGGCCAAGCGCAAGGGTGTGCACTGTGTCATGTCCCTGGGGGTG
CCCGGCCCCGCCACCCTTGCCAAGGCCCTCCTCCAGACCCACCCCGAGGCCCAGCGGGCCATTGAGGCAG
CCCCTCAGGAGCCTGAGCAGAAACGGAGCAGGCAGGACCCAGGCACAGACAGAACAGAAGACAGTGGATT
AGCAGCGGGGCCTCCTGAGGCTGCTGGGGAGAACTTTGCCCCCTGCTCTGTGGCGCCCGGCAAGTCCCTG
TAA

Translation (140 aa):
MPLPEPSEQEGESVKASQEPSPKPGTEVIPAAPRKPRKFSKLVLLTASKDSTKVAGAKRKGVHCVMSLGV
PGPATLAKALLQTHPEAQRAIEAAPQEPEQKRSRQDPGTDRTEDSGLAAGPPEAAGENFAPCSVAPGKSL


Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
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