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Report for CCDS46968.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
46968.1 Public Homo sapiens 3 ALG3 24 110 108 CCDS HistoryNCBI Gene:10195Re-query CCDS DB by CCDS ID:46968.1Re-query CCDS DB by GeneID:10195See the combined annotation on chromosome 3 in Sequence Viewer

Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 46968.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000397676.8 ENSP00000380793.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000397676.8Link to Ensembl Protein Viewer:ENSP00000380793.3Re-query CCDS DB by Nucleotide ID:ENST00000397676Re-query CCDS DB by Protein ID:ENSP00000380793
Original member Current member NCBI NM_005787.6 NP_005778.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_005787.6Link to Protein Sequence:NP_005778.1Re-query CCDS DB by Nucleotide ID:NM_005787Re-query CCDS DB by Protein ID:NP_005778Link to BLAST:NP_005778.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_005778.1 438 Q92685-1 438 100% 0 0

Chromosomal Locations for CCDS 46968.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 3 (NC_000003.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3See the combined annotation on chromosome 3 in Sequence Viewer

Chromosome Start Stop Links
3 184242514 184242676 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 184242813 184242957 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 184243554 184243630 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 184243791 184243996 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 184244601 184244721 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 184245198 184245358 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 184245468 184245615 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 184245713 184245812 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 184248745 184248940 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1317 nt):
ATGGCGGCTGGGCTGCGGAAACGCGGCCGGTCCGGTTCCGCGGCCCAGGCAGAGGGACTCTGCAAGCAAT
GGCTGCAGCGCGCCTGGCAAGAGCGGCGCCTGCTGCTGCGGGAGCCGCGCTACACGCTGCTGGTGGCCGC
CTGCCTCTGCCTGGCGGAGGTGGGCATCACCTTCTGGGTCATTCACAGGGTGGCATACACAGAGATTGAC
TGGAAGGCCTACATGGCCGAGGTAGAAGGCGTCATCAATGGTACCTATGACTATACCCAACTGCAGGGTG
ACACCGGACCACTTGTGTACCCAGCTGGTTTCGTGTACATCTTTATGGGGTTGTACTATGCCACCAGCCG
AGGCACTGACATCCGCATGGCCCAGAACATCTTTGCTGTGCTCTACCTGGCTACCTTGCTGCTTGTCTTC
TTGATCTATCACCAGACCTGCAAGGTACCTCCCTTCGTCTTTTTCTTCATGTGCTGCGCCTCTTACCGTG
TCCACTCCATCTTTGTGCTGCGGCTCTTCAATGACCCAGTGGCCATGGTGCTGCTCTTCCTCAGTATCAA
CCTCCTGCTGGCCCAGCGCTGGGGCTGGGGTTGCTGCTTTTTCAGCCTGGCAGTCTCTGTGAAGATGAAT
GTGCTGCTCTTCGCCCCTGGGTTACTGTTTCTTCTCCTCACACAGTTTGGCTTCCGTGGGGCCCTCCCCA
AGCTGGGAATCTGTGCTGGCCTTCAGGTGGTGCTGGGGCTGCCCTTCCTGCTGGAGAACCCCAGCGGCTA
CCTGTCCCGCTCCTTTGACCTTGGCCGCCAGTTTCTGTTCCACTGGACAGTGAACTGGCGCTTCCTCCCA
GAGGCGCTCTTCCTGCATCGAGCCTTCCACCTGGCCCTGTTGACTGCCCACCTCACCCTGCTCCTGCTGT
TTGCCCTCTGCAGGTGGCACAGGACAGGGGAAAGTATCTTGTCGCTGCTGAGGGATCCCTCCAAAAGGAA
GGTTCCACCCCAGCCCCTTACACCCAACCAGATCGTTTCTACCCTCTTCACCTCCAACTTCATTGGCATC
TGCTTCAGCCGCTCCCTCCACTACCAGTTCTACGTCTGGTATTTCCACACACTGCCCTACCTCCTGTGGG
CCATGCCTGCACGCTGGCTCACACACCTGCTCAGGTTGTTGGTGCTGGGGCTCATCGAGCTCTCCTGGAA
CACATACCCTTCCACATCCTGCAGCTCTGCTGCCCTGCACATATGCCATGCCGTCATCCTGCTGCAGCTC
TGGCTGGGCCCGCAGCCTTTCCCCAAGAGCACCCAACACAGCAAGAAAGCCCACTGA

Translation (438 aa):
MAAGLRKRGRSGSAAQAEGLCKQWLQRAWQERRLLLREPRYTLLVAACLCLAEVGITFWVIHRVAYTEID
WKAYMAEVEGVINGTYDYTQLQGDTGPLVYPAGFVYIFMGLYYATSRGTDIRMAQNIFAVLYLATLLLVF
LIYHQTCKVPPFVFFFMCCASYRVHSIFVLRLFNDPVAMVLLFLSINLLLAQRWGWGCCFFSLAVSVKMN
VLLFAPGLLFLLLTQFGFRGALPKLGICAGLQVVLGLPFLLENPSGYLSRSFDLGRQFLFHWTVNWRFLP
EALFLHRAFHLALLTAHLTLLLLFALCRWHRTGESILSLLRDPSKRKVPPQPLTPNQIVSTLFTSNFIGI
CFSRSLHYQFYVWYFHTLPYLLWAMPARWLTHLLRLLVLGLIELSWNTYPSTSCSSAALHICHAVILLQL
WLGPQPFPKSTQHSKKAH


Links Key
 Links to:   History report
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  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
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