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Report for CCDS2376.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
2376.1 Public Homo sapiens 2 METTL21A 24 110 108 CCDS HistoryNCBI Gene:151194Re-query CCDS DB by CCDS ID:2376.1Re-query CCDS DB by GeneID:151194See the combined annotation on chromosome 2 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 2376.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000406927.6 ENSP00000385481.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000406927.6Link to Ensembl Protein Viewer:ENSP00000385481.2Re-query CCDS DB by Nucleotide ID:ENST00000406927Re-query CCDS DB by Protein ID:ENSP00000385481
Original member Current member EBI ENST00000442521.1 ENSP00000392062.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000442521.1Link to Ensembl Protein Viewer:ENSP00000392062.1Re-query CCDS DB by Nucleotide ID:ENST00000442521Re-query CCDS DB by Protein ID:ENSP00000392062
Original member Current member EBI ENST00000426075.5 ENSP00000403317.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000426075.5Link to Ensembl Protein Viewer:ENSP00000403317.1Re-query CCDS DB by Nucleotide ID:ENST00000426075Re-query CCDS DB by Protein ID:ENSP00000403317
Original member Current member EBI ENST00000448007.6 ENSP00000407622.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000448007.6Link to Ensembl Protein Viewer:ENSP00000407622.2Re-query CCDS DB by Nucleotide ID:ENST00000448007Re-query CCDS DB by Protein ID:ENSP00000407622
Original member Current member EBI ENST00000411432.6 ENSP00000415115.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000411432.6Link to Ensembl Protein Viewer:ENSP00000415115.1Re-query CCDS DB by Nucleotide ID:ENST00000411432Re-query CCDS DB by Protein ID:ENSP00000415115
Original member Current member NCBI NM_001127395.5 NP_001120867.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001127395.5Link to Protein Sequence:NP_001120867.1Re-query CCDS DB by Nucleotide ID:NM_001127395Re-query CCDS DB by Protein ID:NP_001120867Link to BLAST:NP_001120867.1
Original member Current member NCBI NM_001330130.2 NP_001317059.1 Accepted alive Link to Nucleotide Sequence:NM_001330130.2Link to Protein Sequence:NP_001317059.1Re-query CCDS DB by Nucleotide ID:NM_001330130Re-query CCDS DB by Protein ID:NP_001317059Link to BLAST:NP_001317059.1
Original member Current member NCBI NM_001330134.2 NP_001317063.1 Accepted alive Link to Nucleotide Sequence:NM_001330134.2Link to Protein Sequence:NP_001317063.1Re-query CCDS DB by Nucleotide ID:NM_001330134Re-query CCDS DB by Protein ID:NP_001317063Link to BLAST:NP_001317063.1
Original member Current member NCBI NM_145280.7 NP_660323.3 Accepted alive Link to Nucleotide Sequence:NM_145280.7Link to Protein Sequence:NP_660323.3Re-query CCDS DB by Nucleotide ID:NM_145280Re-query CCDS DB by Protein ID:NP_660323Link to BLAST:NP_660323.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001120867.1 218 Q8WXB1-1 218 100% 0 0
NP_001317059.1 218 Q8WXB1-1 218 100% 0 0
NP_001317063.1 218 Q8WXB1-1 218 100% 0 0
NP_660323.3 218 Q8WXB1-1 218 100% 0 0

Chromosomal Locations for CCDS 2376.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 2 (NC_000002.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2See the combined annotation on chromosome 2 in Sequence Viewer

Chromosome Start Stop Links
2 207613046 207613443 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 207621806 207621917 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 207624229 207624375 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (657 nt):
ATGGCCCTCGTGCCCTATGAGGAGACCACGGAATTTGGGTTGCAGAAATTCCACAAGCCTCTTGCAACTT
TTTCCTTTGCAAACCACACGATCCAGATCCGGCAGGACTGGAGACACCTGGGAGTCGCAGCGGTGGTTTG
GGATGCGGCCATCGTTCTTTCCACATACCTGGAGATGGGAGCTGTGGAGCTCAGGGGCCGCTCTGCCGTG
GAGCTGGGTGCTGGCACGGGGCTGGTGGGCATAGTGGCTGCCCTGCTGGGTGCTCATGTGACTATCACGG
ATCGAAAAGTAGCATTAGAATTTCTTAAATCAAACGTTCAAGCCAACTTACCTCCTCATATCCAAACTAA
AACTGTTGTTAAGGAGCTGACTTGGGGACAAAATTTGGGGAGTTTTTCTCCTGGAGAATTTGACCTGATA
CTTGGTGCTGATATCATATATTTAGAAGAAACATTCACAGATCTTCTTCAGACACTGGAACATCTCTGTA
GCAATCACTCTGTGATTCTTTTAGCATGCCGAATTCGCTATGAACGGGATAACAACTTCTTAGCAATGCT
GGAGAGGCAATTTACTGTGAGAAAGGTTCACTACGATCCTGAAAAAGATGTACATATTTACGAAGCACAG
AAGAGAAACCAGAAGGAGGACTTATAA

Translation (218 aa):
MALVPYEETTEFGLQKFHKPLATFSFANHTIQIRQDWRHLGVAAVVWDAAIVLSTYLEMGAVELRGRSAV
ELGAGTGLVGIVAALLGAHVTITDRKVALEFLKSNVQANLPPHIQTKTVVKELTWGQNLGSFSPGEFDLI
LGADIIYLEETFTDLLQTLEHLCSNHSVILLACRIRYERDNNFLAMLERQFTVRKVHYDPEKDVHIYEAQ
KRNQKEDL


Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
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 Genome Browser Links:   Ensembl Genome Browser
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