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Report for CCDS69588.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
69588.1 Public Homo sapiens 9 STOML2 24 110 108 CCDS HistoryNCBI Gene:30968Re-query CCDS DB by CCDS ID:69588.1Re-query CCDS DB by GeneID:30968See the combined annotation on chromosome 9 in Sequence Viewer

Public since: CCDS release 15, NCBI annotation release 105, Ensembl annotation release 74

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 69588.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000452248.6 ENSP00000395743.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000452248.6Link to Ensembl Protein Viewer:ENSP00000395743.2Re-query CCDS DB by Nucleotide ID:ENST00000452248Re-query CCDS DB by Protein ID:ENSP00000395743
Original member Current member NCBI NM_001287031.2 NP_001273960.1 Accepted alive Link to Nucleotide Sequence:NM_001287031.2Link to Protein Sequence:NP_001273960.1Re-query CCDS DB by Nucleotide ID:NM_001287031Re-query CCDS DB by Protein ID:NP_001273960Link to BLAST:NP_001273960.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001273960.1 311 Q9UJZ1-2 311 100% 0 0

Chromosomal Locations for CCDS 69588.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 9 (NC_000009.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9See the combined annotation on chromosome 9 in Sequence Viewer

Chromosome Start Stop Links
9 35100035 35100172 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 35100598 35100726 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 35100932 35101011 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 35101135 35101279 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 35101710 35101811 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 35101904 35101962 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 35102095 35102194 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 35102686 35102823 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 35103050 35103094 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (936 nt):
ATGCTGGCGCGCGCGGCGCGGGGCACTGGGGCCCTTTTGCTGAGGGGCTCTCTACTGGCTTCTGGCCGCG
CTCCGCGCCGCGCCTCCTCTGGATTGCCCCGAAACACCGTGGTACTGTTCGTGCCGCAGCAGGAGGCCTG
GGTGGTGGAGCGAATGGGCCGATTCCACCGGATCCTGGAGCCTGGTTTGAACATCCTCATCCCTGTGTTA
GACCGGATCCGATATGTGCAGAGTCTCAAGGAAATTGTCATCAACGTGCCTGAGCAGTCGGCTGTGACTC
TCGACAATGTAACTCTGCAAATCGATGGAGTCCTTTACCTGCGCATCATGGACCCTTACAAGGCAAGCTA
CGGTGTGGAGGACCCTGAGTATGCCGTCACCCAGCTAGCTCAAACAACCATGAGATCAGAGCTCGGCAAA
CTCTCTCTGGACAAAGTCTTCCGGGTGGAGGCAGAGCGGCGGAAACGGGCCACAGTTCTAGAGTCTGAGG
GGACCCGAGAGTCGGCCATCAATGTGGCAGAAGGGAAGAAACAGGCCCAGATCCTGGCCTCCGAAGCAGA
AAAGGCTGAACAGATAAATCAGGCAGCAGGAGAGGCCAGTGCAGTTCTGGCGAAGGCCAAGGCTAAAGCT
GAAGCTATTCGAATCCTGGCTGCAGCTCTGACACAACATAATGGAGATGCAGCAGCTTCACTGACTGTGG
CCGAGCAGTATGTCAGCGCGTTCTCCAAACTGGCCAAGGACTCCAACACTATCCTACTGCCCTCCAACCC
TGGCGATGTCACCAGCATGGTGGCTCAGGCCATGGGTGTATATGGAGCCCTCACCAAAGCCCCAGTGCCA
GGGACTCCAGACTCACTCTCCAGTGGGAGCAGCAGAGATGTCCAGGGTACAGATGCAAGTCTTGATGAGG
AACTTGATCGAGTCAAGATGAGTTAG

Translation (311 aa):
MLARAARGTGALLLRGSLLASGRAPRRASSGLPRNTVVLFVPQQEAWVVERMGRFHRILEPGLNILIPVL
DRIRYVQSLKEIVINVPEQSAVTLDNVTLQIDGVLYLRIMDPYKASYGVEDPEYAVTQLAQTTMRSELGK
LSLDKVFRVEAERRKRATVLESEGTRESAINVAEGKKQAQILASEAEKAEQINQAAGEASAVLAKAKAKA
EAIRILAAALTQHNGDAAASLTVAEQYVSAFSKLAKDSNTILLPSNPGDVTSMVAQAMGVYGALTKAPVP
GTPDSLSSGSSRDVQGTDASLDEELDRVKMS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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