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Report for CCDS53945.1 (current version)
CCDS |
Status |
Species |
Chrom. |
Gene |
CCDS Release |
NCBI Annotation Release |
Ensembl Annotation Release |
Links |
53945.1 |
Public |
Homo sapiens |
15 |
DMXL2 |
24 |
110 |
108 |
![CCDS History](IMG/ccds-History.jpg) ![](/corehtml/transparent.gif) ![NCBI Gene:23312](IMG/ccds-Gene.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by CCDS ID:53945.1](IMG/ccds-Cquery.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by GeneID:23312](IMG/ccds-Gquery.jpg) ![](/corehtml/transparent.gif) ![See the combined annotation on chromosome 15 in Sequence Viewer](IMG/ccds-SeqViewer.jpg) ![](/corehtml/transparent.gif) |
Public since: CCDS release 8, NCBI annotation release 37.2, Ensembl annotation release 62
Review status: Reviewed (by RefSeq and Havana) Sequence IDs included in CCDS 53945.1
Original |
Current |
Source |
Nucleotide ID |
Protein ID |
MANE |
Status in CCDS |
Seq. Status |
Links |
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![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENST00000449909.7 |
ENSP00000400855.3 |
|
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENST00000449909.7](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSP00000400855.3](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENST00000449909](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSP00000400855](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_001174117.3 |
NP_001167588.1 |
|
Accepted |
alive |
![Link to Nucleotide Sequence:NM_001174117.3](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_001167588.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_001174117](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_001167588](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_001167588.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
RefSeq |
Length |
Related UniProtKB/SwissProt |
Length |
Identity |
Gaps |
Mismatches |
NP_001167588.1 |
2400 |
Q8TDJ6-2 |
2400 |
100% |
0 |
0 |
Chromosomal Locations for CCDS 53945.1
Assembly GRCh38.p14 (GCF_000001405.40)
CCDS Sequence Data |
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Blue highlighting indicates alternating exons. | Red highlighting indicates amino acids encoded across a splice junction. | | Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair. |
Nucleotide Sequence (7203 nt): ATGCATCTGCATCAGGTCCTCACCGGAGCTGTCAACCCTGGAGACAACTGCTACTCCGTGGGCAGCGTCG GGGATGTCCCCTTCACGGCATATGGATCAGGCTGTGATATTGTTATTTTGGCAAATGACTTTGAATGTGT ACAGATCATTCCTGGTGCTAAGCATGGAAACATCCAAGTCAGCTGTGTGGAGTGTTCTAACCAACAAGGA AGAATTGCAGCTTCATATGGTAATGCTGTTTGTATATTTGAGCCCTTGGGCATAAATTCTCATAAAAGAA ATTGTCAACTCAAGTGCCAGTGGCTTAAAACTGGGCAGTTTTTTTTGAGTTCTGTGACATACAACTTAGC ATGGGATCCTCAAGATAATAGATTGTTGACAGCAACTGATTCTATTCAGTTGTGGGCTCCTCCAGGAGAT GATATTCTGGAAGAGGAGGAAGAAATTGATAATACAGTTCCTCCTGTTTTAAATGATTGGAAGTGTGTCT GGCAGTGCAAAACCTCAGTATCTGTACATTTGATGGAATGGTCTCCTGATGGTGAATATTTTGCTACTGC TGGAAAGGATGATTGTCTTTTGAAAGTGTGGTATCCTATGACTGGTTGGAAGTCTTCAATTATACCTCAG GATCATCATGAAGTAAAAAGGAGACAGTCCTCTACTCAATTTTCTTTTGTTTACTTGGCACATCCCCGAG CTGTGACAGGTTTTTCGTGGCGCAAAACTAGCAAGTATATGCCCAGGGGTTCTGTCTGTAATGTGTTGTT AACTTCATGTCATGATGGTGTGTGCCGGCTCTGGGCAGAAACTTTATTACCAGAAGACTGTCTTTTGGGT GAGCAGATTTGTGAGACTACCACTTCCAGCATTGCCAGCAGCCTTTCTCATGCTGGAAGACACAAAGACA GAATACAGCATGCTCTTGAGACAATACACCATTTGAAAAATTTAAGGAAAGGACAGAGGAGGTCATCTGT TCTTGTAACTCATGCTGAATTAATGCCCGACCAGACAGCAATGCATGAAGTTCAAAGACACATTTCCCAC CATGCAAATGCACTCTGTCATTTTCATATTGCAGCAAGCATCAACCCTGCCACAGATATTCCAAATGTCT TGGTTGGCACTGCATTTAATGTTGATGATGGAAATGGGGGCTTTGTAGTTCATTGGTTAAACAACAAGGA ATTTCATTTTACATCATCTACAGAAGTATTTATGCATCAATTACGAAAACTTTCTGATAAGCAGGTAGAT CATGAAAATGATGATGCAGATAGAGAAGATGAGGAACATTCACAGGAGGATAGAGAACGGGGTTTACATA TGAAATTAGACCATGATTTATCCCTGGATAGAGAATCTGAGGCAGGTACAGGATCATCAGAACATGAAGA TGGAGAAAGAGAAGGAAGTCCTAGAACTTACTCACGACTTAGTGTACCAATGCCACTGCCTACGGTTCTG CTTGATCGGAAGATTGAAACGCTGCTAACTGAATGGAATAAGAATCCTGATATGCTTTTTACAATACACC CTGTAGATGGTACCTTTCTAGTGTGGCATGTGAAGTATTTGGATGAATATAATCCTGGAATATTTAGACA AGTTCAGGTTTCTTTTTCTTCTCGGATTCCTGTTGCATTTCCCTCTGGTGATGCAAGCTCTCTTAGTAAA AATATCATGATGTATGCCTGTATAAATGCGACAAAAGATTCTCACCACACGCTGTTACACCAGGAGGGGA TGTCTGTAGGCAGTCCTCACGGATCACAGCCACACTCTAGATCCCACAGTACACATATGAACATCTTAGC TCCCACAGTAATGATGATCTCTAAACACATAGATGGTTCTTTAAATCAGTGGGCAGTCACTTTTGCTGAT AAGTCTGCCTTTACCACTGTTCTAACTGTATCTCACAAATTTAGATATTGCGGTCATCGATTTCACCTCA ATGACCTGGCATGTCATTCAGTTTTACCACTGTTATTGACATCCTCTCATCATAATGCTCTATTGACTCC TGAATTAGATTGTCAGTGGGACTCAGACAATAAATTAAGTAGATTAATGGACCCTGTAAAACATATAAAA GGTTCCTCGAAACAACCTCTTAGAAATGCAGCAACTCGTACATTTCATGACCCAAATGCAATCTACAGTG AACTTATTCTGTGGCGTGTAGACCCAATAGGACCTTTGTCATACACTGGAGGAGTATCAGAATTGGCTCG AATTAACTCTTTACATACCTCAGCGTTCTCTAATGTGGCTTGGCTTCCAACTCTCATTCCCAGTTACTGT CTAGGCACATACTGCAATTCTGCAAGTGCTTGCTTTGTTGCTTCTGATGGCAAAAATCTGAGACTCTATC AAGCTGTAGTGGATGCAAGGAAATTATTAGATGAATTGTCAGACCCAGAATCTTCAAAACTTATTGGAGA AGTGTTTAATATTGTGAGCCAACAGTCTACTGCTCGACCTGGCTGCATTATTGAACTCGACGCAATAACC AACCAATGTGGCTCAAATACACAGTTGCTTCATGTGTTTCAAGAAGACTTCATTATAGGATATAAACCAC ATAAGGAAGATATGGAGAAAAAGGAAACAGAAATATTTTTTCAGCCATCACAAGGATACCGCCCACCACC ATTTTCAGAAAAGTTCTTTCTAGTAGTAATTGAGAAGGACAGCAATAATAACTCTATTCTGCATATGTGG CACCTTCATCTTAAATCTGTACAAGCATGTTTAGGAAGAGATACATTAGATGAGTGTGGTTTGAGATACT TGTTAGCTATGCGCCTACACACATGCCTTTTGACATCGCTGCCTCCTTTATACCGAGTGCAGCTACTTCA TCAAGGTGTCTCTACATGCCATTTTGCCTGGGCTTTTCATTCTGAGGCTGAAGAAGAACTGATTAATATG ATTCCAGCAATTCAGAGAGGGGACCCCCAGTGGTCTGAATTAAGAGCTATGGGCATAGGATGGTGGGTGA GGAACATTAACACGCTTCGAAGATGCATTGAAAAGGTTGCCAAAGCTTCTTTTCAAAGGAACAATGATGC CTTAGATGCTGCACTATTCTACCTTTCAATGAAGAAGAAAGCAGTAGTGTGGGGTCTGTTTAGGTCACAG CATGATGAAAAAATGACAACATTTTTCAGCCACAACTTTAATGAAGATAGATGGCGAAAAGCTGCTTTGA AAAATGCTTTTTCCTTACTTGGAAAACAACGCTTTGAACAATCGGCTGCTTTTTTCTTGCTAGCTGGTTC ATTGAAAGATGCCATAGAGGTATGTCTTGAAAAAATGGAAGATATTCAGCTAGCCATGGTTATTGCCCGT TTATATGAATCTGAATTTGAGACTTCATCCACTTATATATCCATCCTAAATCAGAAGATTTTGGGTTGCC AAAAGGATGGCTCAGGATTCAGTTGCAAAAGATTACATCCTGATCCTTTCCTGCGTAGTCTTGCCTATTG GGTAATGAAAGATTACACCCGAGCCTTGGACACATTACTGGAACAAACACCAAAGGAGGATGATGAACAT CAAGTTATCATCAAGTCTTGTAACCCGGTGGCATTTAGTTTTTATAACTACCTTCGAACTCATCCTTTGC TCATTCGAAGAAATCTTGCCTCCCCTGAAGGAACTTTGGCAACCTTAGGTCTCAAAACTGAGAAGAACTT TGTTGATAAAATTAACCTCATAGAAAGAAAATTATTCTTTACCACTGCAAATGCTCATTTTAAAGTTGGA TGCCCTGTTTTAGCCTTGGAGGTACTCTCCAAAATTCCAAAAGTAACCAAAACATCTGCCTTATCTGCAA AAAAAGATCAGCCTGACTTCATTTCTCACAGGATGGATGATGTACCTTCACATTCAAAAGCTCTGAGTGA TGGCAATGGAAGTTCTGGCATTGAATGGTCAAATGTAACTTCATCACAGTATGACTGGAGTCAGCCAATA GTAAAAGTTGATGAGGAACCTCTTAATCTTGATTGGGGTGAAGATCACGACAGTGCCTTAGATGAAGAGG AAGACGATGCTGTTGGTTTAGTGATGAAAAGTACAGATGCCAGGGAAAAAGATAAACAATCAGATCAGAA GGCCTCAGACCCTAACATGTTATTAACACCTCAGGAAGAGGATGATCCTGAAGGTGATACTGAAGTTGAT GTGATTGCTGAACAACTAAAATTCAGAGCTTGTTTAAAGATCCTTATGACTGAATTAAGAACATTGGCTA CAGGTTATGAAGTAGATGGAGGAAAACTCAGATTTCAACTCTATAACTGGCTTGAAAAGGAAATTGCTGC CTTGCATGAGATATGTAATCATGAATCAGTTATTAAAGAGTATTCCAGTAAGACATATTCCAAAGTAGAG AGTGATCTGCTGGATCAGGAAGAAATGGTAGACAAACCAGATATTGGTTCCTATGAGCGCCATCAAATAG AAAGAAGAAGATTGCAGGCCAAACGAGAGCATGCAGAAAGACGAAAGTCGTGGTTGCAGAAAAACCAAGA TCTCCTGAGAGTATTTCTCAGCTACTGTAGCCTTCATGGGGCCCAAGGTGGTGGTTTGGCTTCAGTAAGG ATGGAACTCAAATTTTTGCTACAAGAATCACAACAGGAAACTACAGTAAAGCAGCTCCAGTCTCCACTAC CACTGCCTACCACCCTACCTCTGCTTTCAGCAAGTATTGCGTCAACAAAAACAGTCATAGCTAATCCTGT ATTGTACTTAAATAATCACATCCATGATATACTTTATACTATTGTTCAGATGAAAACACCACCTCATCCC AGTATTGAAGATGTGAAGGTGCACACACTTCATTCACTAGCAGCATCACTTTCTGCATCAATTTACCAAG CATTATGTGACAGTCATAGCTACAGTCAAACAGAAGGAAATCAGTTTACAGGAATGGCTTATCAAGGACT TCTTTTAAGTGATCGTAGAAGACTAAGGACAGAAAGCATTGAAGAACACGCAACACCAAATTCATCTCCT GCTCAATGGCCTGGTGTGAGCTCACTTATTAATCTTTTGAGTTCAGCCCAAGATGAAGACCAGCCAAAAC TGAACATTTTGCTATGTGAAGCTGTTGTTGCTGTTTACTTAAGTTTATTGATACATGCTCTTGCCACAAA TTCCTCCAGTGAATTATTTCGGCTTGCAGCCCACCCATTAAATAATCGAATGTGGGCTGCTGTTTTTGGA GGCGGTGTAAAACTTGTTGTGAAACCTCGAAGACAATCAGAAAATATTTCAGCACCTCCTGTCCTTTCTG AAGACATAGATAAACACCGTAGGAGATTTAACATGAGAATGCTCGTCCCTGGAAGGCCTGTAAAAGATGC TACCCCACCACCGGTGCCTGCAGAAAGACCATCTTACAAAGAAAAATTTATTCCTCCCGAACTTAGTATG TGGGATTATTTTGTTGCAAAGCCATTTCTTCCTTTGTCTGATAGTGGTGTTATATATGATTCTGATGAAA GCATTCATAGTGATGAAGAAGATGATGCCTTTTTTTCAGATACACAAATACAGGAGCACCAAGATCCAAA TTCCTATAGCTGGGCTCTTCTACATTTGACAATGGTTAAACTAGCACTTCACAATGTCAAGAATTTCTTT CCTATTGCTGGACTGGAATTCTCTGAGCTGCCTGTAACATCACCATTAGGTATTGCTGTGATTAAAAACT TGGAGAACTGGGAACAGATCTTGCAAGAGAAAATGGATCAGTTTGAAGGTCCACCCCCTAACTATATCAA CACATATCCAACTGACCTTTCAGTGGGAGCTGGACCAGCTATTCTTCGAAATAAAGCAATGCTAGAACCT GAAAATACCCCATTCAAGTCCCGGGATTCTTCTGCATTTCCAGTCAAACGACTTTGGCATTTCCTTGTTA AACAAGAGGTCCTTCAAGAGACATTTATTAGATATATTTTCACTAAGAAAAGAAAGCAGAGTGAGGTTGA AGCTGATCTGGGCTATCCAGGTGGAAAGGCGAAAGTCATCCATAAGGAATCTGATATGATCATGGCATTT TCTGTTAATAAGGCAAATTGTAATGAAATTGTTTTGGCTTCAACACATGATGTTCAAGAACTTGATGTTA CTTCTCTACTGGCCTGTCAGTCATACATATGGATCGGAGAAGAATATGACAGAGAATCCAAAAGTTCAGA TGATGTTGATTATCGTGGTTCCACTACAACTCTTTATCAACCCAGTGCAACATCCTATTCAGCAAGTCAG GTGCATCCACCTTCATCTCTGCCATGGCTGGGCACTGGACAGACTAGCACTGGAGCTAGTGTGCTTATGA AAAGGAATCTACATAATGTTAAGAGAATGACTTCACACCCAGTCCATCAATACTATCTTACAGGTGCTCA GGACGGCAGTGTACGAATGTTTGAATGGACGCGGCCTCAGCAACTTGTCTGCTTTCGTCAAGCTGGCAAT GCAAGAGTTACTAGATTATATTTTAATTCACAAGGCAACAAGTGTGGTGTTGCGGATGGAGAGGGTTTTC TGAGTATCTGGCAAGTTAACCAAACTGCATCAAATCCTAAACCTTATATGAGTTGGCAGTGCCACAGTAA AGCCACAAGTGACTTTGCATTTATTACCTCTTCAAGTCTAGTTGCCACATCTGGACACTCCAATGACAAT AGAAATGTTTGCCTCTGGGACACATTAATATCACCCGGAAACAGCCTCATTCATGGTTTCACGTGCCACG ATCATGGTGCCACGGTACTGCAGTATGCACCCAAACAGCAACTCCTAATCTCGGGGGGTAGGAAAGGACA CGTCTGCATTTTTGACATCAGGCAAAGGCAGCTCATTCACACGTTCCAGGCCCATGACTCAGCTATTAAG GCTCTGGCCTTGGATCCCTATGAGGAATATTTTACCACAGGTTCAGCAGAAGGTAACATAAAGGTTTGGA GATTGACAGGCCATGGCCTAATTCATTCATTTAAAAGTGAACATGCTAAGCAGTCCATATTTCGAAACAT TGGGGCTGGAGTCATGCAGATTGACATCATCCAGGGCAATCGGCTCTTCTCCTGTGGTGCAGATGGCACG CTGAAAACCAGGGTTTTGCCCAATGCTTTTAACATCCCTAACAGAATTCTTGACATTCTATAA
Translation (2400 aa): MHLHQVLTGAVNPGDNCYSVGSVGDVPFTAYGSGCDIVILANDFECVQIIPGAKHGNIQVSCVECSNQQG RIAASYGNAVCIFEPLGINSHKRNCQLKCQWLKTGQFFLSSVTYNLAWDPQDNRLLTATDSIQLWAPPGD DILEEEEEIDNTVPPVLNDWKCVWQCKTSVSVHLMEWSPDGEYFATAGKDDCLLKVWYPMTGWKSSIIPQ DHHEVKRRQSSTQFSFVYLAHPRAVTGFSWRKTSKYMPRGSVCNVLLTSCHDGVCRLWAETLLPEDCLLG EQICETTTSSIASSLSHAGRHKDRIQHALETIHHLKNLRKGQRRSSVLVTHAELMPDQTAMHEVQRHISH HANALCHFHIAASINPATDIPNVLVGTAFNVDDGNGGFVVHWLNNKEFHFTSSTEVFMHQLRKLSDKQVD HENDDADREDEEHSQEDRERGLHMKLDHDLSLDRESEAGTGSSEHEDGEREGSPRTYSRLSVPMPLPTVL LDRKIETLLTEWNKNPDMLFTIHPVDGTFLVWHVKYLDEYNPGIFRQVQVSFSSRIPVAFPSGDASSLSK NIMMYACINATKDSHHTLLHQEGMSVGSPHGSQPHSRSHSTHMNILAPTVMMISKHIDGSLNQWAVTFAD KSAFTTVLTVSHKFRYCGHRFHLNDLACHSVLPLLLTSSHHNALLTPELDCQWDSDNKLSRLMDPVKHIK GSSKQPLRNAATRTFHDPNAIYSELILWRVDPIGPLSYTGGVSELARINSLHTSAFSNVAWLPTLIPSYC LGTYCNSASACFVASDGKNLRLYQAVVDARKLLDELSDPESSKLIGEVFNIVSQQSTARPGCIIELDAIT NQCGSNTQLLHVFQEDFIIGYKPHKEDMEKKETEIFFQPSQGYRPPPFSEKFFLVVIEKDSNNNSILHMW HLHLKSVQACLGRDTLDECGLRYLLAMRLHTCLLTSLPPLYRVQLLHQGVSTCHFAWAFHSEAEEELINM IPAIQRGDPQWSELRAMGIGWWVRNINTLRRCIEKVAKASFQRNNDALDAALFYLSMKKKAVVWGLFRSQ HDEKMTTFFSHNFNEDRWRKAALKNAFSLLGKQRFEQSAAFFLLAGSLKDAIEVCLEKMEDIQLAMVIAR LYESEFETSSTYISILNQKILGCQKDGSGFSCKRLHPDPFLRSLAYWVMKDYTRALDTLLEQTPKEDDEH QVIIKSCNPVAFSFYNYLRTHPLLIRRNLASPEGTLATLGLKTEKNFVDKINLIERKLFFTTANAHFKVG CPVLALEVLSKIPKVTKTSALSAKKDQPDFISHRMDDVPSHSKALSDGNGSSGIEWSNVTSSQYDWSQPI VKVDEEPLNLDWGEDHDSALDEEEDDAVGLVMKSTDAREKDKQSDQKASDPNMLLTPQEEDDPEGDTEVD VIAEQLKFRACLKILMTELRTLATGYEVDGGKLRFQLYNWLEKEIAALHEICNHESVIKEYSSKTYSKVE SDLLDQEEMVDKPDIGSYERHQIERRRLQAKREHAERRKSWLQKNQDLLRVFLSYCSLHGAQGGGLASVR MELKFLLQESQQETTVKQLQSPLPLPTTLPLLSASIASTKTVIANPVLYLNNHIHDILYTIVQMKTPPHP SIEDVKVHTLHSLAASLSASIYQALCDSHSYSQTEGNQFTGMAYQGLLLSDRRRLRTESIEEHATPNSSP AQWPGVSSLINLLSSAQDEDQPKLNILLCEAVVAVYLSLLIHALATNSSSELFRLAAHPLNNRMWAAVFG GGVKLVVKPRRQSENISAPPVLSEDIDKHRRRFNMRMLVPGRPVKDATPPPVPAERPSYKEKFIPPELSM WDYFVAKPFLPLSDSGVIYDSDESIHSDEEDDAFFSDTQIQEHQDPNSYSWALLHLTMVKLALHNVKNFF PIAGLEFSELPVTSPLGIAVIKNLENWEQILQEKMDQFEGPPPNYINTYPTDLSVGAGPAILRNKAMLEP ENTPFKSRDSSAFPVKRLWHFLVKQEVLQETFIRYIFTKKRKQSEVEADLGYPGGKAKVIHKESDMIMAF SVNKANCNEIVLASTHDVQELDVTSLLACQSYIWIGEEYDRESKSSDDVDYRGSTTTLYQPSATSYSASQ VHPPSSLPWLGTGQTSTGASVLMKRNLHNVKRMTSHPVHQYYLTGAQDGSVRMFEWTRPQQLVCFRQAGN ARVTRLYFNSQGNKCGVADGEGFLSIWQVNQTASNPKPYMSWQCHSKATSDFAFITSSSLVATSGHSNDN RNVCLWDTLISPGNSLIHGFTCHDHGATVLQYAPKQQLLISGGRKGHVCIFDIRQRQLIHTFQAHDSAIK ALALDPYEEYFTTGSAEGNIKVWRLTGHGLIHSFKSEHAKQSIFRNIGAGVMQIDIIQGNRLFSCGADGT LKTRVLPNAFNIPNRILDIL
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