CCDS
Home
FTP
Process
Releases & Statistics
Collaborators
EBI
HGNC
MGI
NCBI
Contact Us
email CCDS
Genome Displays Related Resources
Gene
HomoloGene
MANE
RefSeq
|
![](/corehtml/transparent.gif) |
Report for CCDS9547.1 (current version)
CCDS |
Status |
Species |
Chrom. |
Gene |
CCDS Release |
NCBI Annotation Release |
Ensembl Annotation Release |
Links |
9547.1 |
Public |
Homo sapiens |
14 |
CCNB1IP1 |
24 |
110 |
108 |
![CCDS History](IMG/ccds-History.jpg) ![](/corehtml/transparent.gif) ![NCBI Gene:57820](IMG/ccds-Gene.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by CCDS ID:9547.1](IMG/ccds-Cquery.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by GeneID:57820](IMG/ccds-Gquery.jpg) ![](/corehtml/transparent.gif) ![See the combined annotation on chromosome 14 in Sequence Viewer](IMG/ccds-SeqViewer.jpg) ![](/corehtml/transparent.gif) |
Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23
Review status: Reviewed (by RefSeq and Havana) Sequence IDs included in CCDS 9547.1
Original |
Current |
Source |
Nucleotide ID |
Protein ID |
MANE |
Status in CCDS |
Seq. Status |
Links |
---|
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENST00000353689.8 |
ENSP00000337396.4 |
|
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENST00000353689.8](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSP00000337396.4](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENST00000353689](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSP00000337396](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENST00000358932.9 |
ENSP00000351810.4 |
MANE Select |
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENST00000358932.9](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSP00000351810.4](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENST00000358932](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSP00000351810](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENST00000398160.6 |
ENSP00000381226.2 |
|
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENST00000398160.6](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSP00000381226.2](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENST00000398160](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSP00000381226](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENST00000398163.6 |
ENSP00000381229.2 |
|
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENST00000398163.6](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSP00000381229.2](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENST00000398163](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSP00000381229](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENST00000398169.7 |
ENSP00000381235.3 |
|
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENST00000398169.7](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSP00000381235.3](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENST00000398169](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSP00000381235](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENST00000437553.6 |
ENSP00000409896.2 |
|
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENST00000437553.6](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSP00000409896.2](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENST00000437553](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSP00000409896](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_021178.5 |
NP_067001.3 |
MANE Select |
Accepted |
alive |
![Link to Nucleotide Sequence:NM_021178.5](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_067001.3](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_021178](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_067001](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_067001.3](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_182849.3 |
NP_878269.1 |
|
Accepted |
alive |
![Link to Nucleotide Sequence:NM_182849.3](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_878269.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_182849](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_878269](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_878269.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_182852.4 |
NP_878272.1 |
|
Accepted |
alive |
![Link to Nucleotide Sequence:NM_182852.4](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_878272.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_182852](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_878272](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_878272.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
Chromosomal Locations for CCDS 9547.1
Assembly GRCh38.p14 (GCF_000001405.40)
CCDS Sequence Data |
---|
Blue highlighting indicates alternating exons. | Red highlighting indicates amino acids encoded across a splice junction. | | Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair. |
Nucleotide Sequence (834 nt): ATGTCTTTGTGTGAAGACATGCTGCTTTGTAATTATCGAAAGTGTCGCATCAAACTCTCTGGCTATGCAT GGGTCACTGCCTGCTCTCACATCTTCTGTGATCAGCATGGCAGTGGTGAGTTTAGTCGCTCACCAGCTAT CTGTCCTGCCTGCAACAGTACCCTTTCTGGAAAGCTAGATATTGTCCGCACAGAACTCAGTCCATCAGAG GAATATAAAGCTATGGTATTGGCAGGACTGCGACCAGAGATCGTGTTGGACATTAGCTCCCGAGCGCTGG CCTTCTGGACATATCAGGTACATCAGGAACGTCTCTATCAAGAATACAATTTCAGCAAGGCTGAGGGCCA TCTGAAACAGATGGAGAAGATATATACTCAGCAAATACAAAGCAAGGATGTAGAATTGACCTCTATGAAA GGGGAGGTTACCTCCATGAAGAAAGTACTAGAAGAATACAAGAAAAAGTTCAGTGACATCTCTGAGAAAC TTATGGAGCGCAATCGTCAGTATCAAAAGCTCCAAGGCCTCTATGATAGCCTTAGGCTACGAAACATCAC TATTGCTAACCATGAAGGCACCCTTGAACCATCCATGATTGCACAGTCTGGTGTTCTTGGCTTCCCATTA GGTAACAACTCCAAGTTTCCTTTGGATAATACACCTGTTCGAAATCGGGGCGATGGAGATGGAGATTTTC AGTTCAGACCATTTTTTGCGGGTTCTCCCACAGCACCTGAACCCAGCAACAGCTTTTTTAGTTTTGTCTC TCCAAGTCGTGAATTAGAGCAGCAGCAAGTTTCTAGCAGGGCCTTCAAAGTAAAAAGAATTTGA
Translation (277 aa): MSLCEDMLLCNYRKCRIKLSGYAWVTACSHIFCDQHGSGEFSRSPAICPACNSTLSGKLDIVRTELSPSE EYKAMVLAGLRPEIVLDISSRALAFWTYQVHQERLYQEYNFSKAEGHLKQMEKIYTQQIQSKDVELTSMK GEVTSMKKVLEEYKKKFSDISEKLMERNRQYQKLQGLYDSLRLRNITIANHEGTLEPSMIAQSGVLGFPL GNNSKFPLDNTPVRNRGDGDGDFQFRPFFAGSPTAPEPSNSFFSFVSPSRELEQQQVSSRAFKVKRI
|