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Report for CCDS10259.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
10259.1 Public Homo sapiens 15 ISLR2 24 110 108 CCDS HistoryNCBI Gene:57611Re-query CCDS DB by CCDS ID:10259.1Re-query CCDS DB by GeneID:57611See the combined annotation on chromosome 15 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 10259.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000361742.7 ENSP00000355402.3 Accepted alive Link to Ensembl Transcript Viewer:ENST00000361742.7Link to Ensembl Protein Viewer:ENSP00000355402.3Re-query CCDS DB by Nucleotide ID:ENST00000361742Re-query CCDS DB by Protein ID:ENSP00000355402
Original member Current member EBI ENST00000435464.5 ENSP00000411443.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000435464.5Link to Ensembl Protein Viewer:ENSP00000411443.1Re-query CCDS DB by Nucleotide ID:ENST00000435464Re-query CCDS DB by Protein ID:ENSP00000411443
Original member Current member EBI ENST00000453268.3 ENSP00000411834.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000453268.3Link to Ensembl Protein Viewer:ENSP00000411834.2Re-query CCDS DB by Nucleotide ID:ENST00000453268Re-query CCDS DB by Protein ID:ENSP00000411834
Original member Current member EBI ENST00000565159.5 ENSP00000455531.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000565159.5Link to Ensembl Protein Viewer:ENSP00000455531.1Re-query CCDS DB by Nucleotide ID:ENST00000565159Re-query CCDS DB by Protein ID:ENSP00000455531
Original member Current member EBI ENST00000565540.1 ENSP00000458080.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000565540.1Link to Ensembl Protein Viewer:ENSP00000458080.1Re-query CCDS DB by Nucleotide ID:ENST00000565540Re-query CCDS DB by Protein ID:ENSP00000458080
Original member Current member NCBI NM_001130136.1 NP_001123608.1 Accepted alive Link to Nucleotide Sequence:NM_001130136.1Link to Protein Sequence:NP_001123608.1Re-query CCDS DB by Nucleotide ID:NM_001130136Re-query CCDS DB by Protein ID:NP_001123608Link to BLAST:NP_001123608.1
Original member Current member NCBI NM_001130137.1 NP_001123609.1 Accepted alive Link to Nucleotide Sequence:NM_001130137.1Link to Protein Sequence:NP_001123609.1Re-query CCDS DB by Nucleotide ID:NM_001130137Re-query CCDS DB by Protein ID:NP_001123609Link to BLAST:NP_001123609.1
Original member Current member NCBI NM_001130138.2 NP_001123610.1 Accepted alive Link to Nucleotide Sequence:NM_001130138.2Link to Protein Sequence:NP_001123610.1Re-query CCDS DB by Nucleotide ID:NM_001130138Re-query CCDS DB by Protein ID:NP_001123610Link to BLAST:NP_001123610.1
Original member Current member NCBI NM_020851.3 NP_065902.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_020851.3Link to Protein Sequence:NP_065902.1Re-query CCDS DB by Nucleotide ID:NM_020851Re-query CCDS DB by Protein ID:NP_065902Link to BLAST:NP_065902.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001123608.1 745 Q6UXK2 745 100% 0 0
NP_001123609.1 745 Q6UXK2 745 100% 0 0
NP_001123610.1 745 Q6UXK2 745 100% 0 0
NP_065902.1 745 Q6UXK2 745 100% 0 0

Chromosomal Locations for CCDS 10259.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 15 (NC_000015.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15See the combined annotation on chromosome 15 in Sequence Viewer

Chromosome Start Stop Links
15 74132755 74134992 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2238 nt):
ATGTTCCCCCTTCGGGCCCTGTGGTTGGTCTGGGCGCTTCTAGGAGTGGCCGGATCATGCCCGGAGCCGT
GCGCCTGCGTGGACAAGTACGCTCACCAGTTCGCGGACTGCGCTTACAAAGAGTTGCGTGAGGTGCCGGA
AGGACTGCCTGCCAACGTGACGACGCTTAGTCTGTCCGCGAACAAGATCACTGTGCTGCGGCGCGGGGCC
TTCGCCGACGTCACACAGGTCACGTCGCTGTGGCTGGCGCACAATGAGGTGCGCACCGTGGAGCCAGGCG
CACTGGCCGTGCTGAGTCAGCTCAAGAACCTCGATCTGAGCCACAACTTCATATCCAGCTTTCCGTGGAG
CGACCTGCGCAACCTGAGCGCGCTGCAGCTGCTCAAAATGAACCACAACCGCCTGGGCTCTCTGCCCCGG
GACGCACTCGGTGCGCTACCCGACCTGCGTTCCCTGCGCATCAACAACAACCGGCTGCGTACGCTGGCGC
CTGGCACCTTCGACGCGCTTAGCGCGCTGTCACACTTGCAACTCTATCACAATCCCTTCCACTGCGGCTG
CGGCCTTGTGTGGCTGCAGGCCTGGGCCGCGAGCACCCGGGTGTCCTTACCCGAGCCCGACTCCATTGCT
TGTGCCTCGCCTCCCGCGCTGCAGGGGGTGCCGGTGTACCGCCTGCCCGCCCTGCCCTGTGCACCGCCCA
GCGTGCATCTGAGTGCCGAGCCACCGCTTGAAGCACCCGGCACCCCACTGCGCGCAGGACTGGCGTTCGT
GTTACACTGCATCGCCGACGGCCACCCTACGCCTCGCCTGCAATGGCAACTTCAGATCCCCGGTGGCACC
GTAGTCTTAGAGCCACCGGTTCTGAGCGGGGAGGACGACGGGGTTGGGGCGGAGGAAGGAGAGGGAGAAG
GAGATGGGGATTTGCTGACGCAGACCCAAGCCCAAACGCCGACTCCAGCACCCGCTTGGCCGGCGCCCCC
AGCCACACCGCGCTTCCTGGCCCTCGCAAATGGCTCCCTGTTGGTGCCCCTCCTGAGTGCCAAGGAGGCG
GGCGTCTACACTTGCCGTGCACACAATGAGCTGGGCGCCAACTCTACGTCAATACGCGTGGCGGTGGCAG
CAACCGGGCCCCCAAAACACGCGCCTGGCGCCGGGGGAGAACCCGACGGACAGGCCCCGACCTCTGAGCG
CAAGTCCACAGCCAAGGGCCGGGGCAACAGCGTCCTGCCTTCCAAACCCGAGGGCAAAATCAAAGGCCAA
GGCCTGGCCAAGGTCAGCATTCTCGGGGAGACCGAGACGGAGCCGGAGGAGGACACAAGTGAGGGAGAGG
AGGCCGAAGACCAGATCCTCGCGGACCCGGCGGAGGAGCAGCGCTGTGGCAACGGGGACCCCTCTCGGTA
CGTTTCTAACCACGCGTTCAACCAGAGCGCAGAGCTCAAGCCGCACGTCTTCGAGCTGGGCGTCATCGCG
CTGGATGTGGCGGAGCGCGAGGCGCGGGTGCAGCTGACTCCGCTGGCTGCGCGCTGGGGCCCTGGGCCCG
GCGGGGCTGGCGGAGCCCCGCGACCCGGGCGGCGACCCCTGCGCCTACTCTATCTGTGTCCAGCGGGGGG
CGGCGCGGCAGTGCAGTGGTCCCGCGTAGAGGAAGGCGTCAACGCCTACTGGTTCCGCGGCCTGCGGCCG
GGTACCAACTACTCCGTGTGCCTGGCGCTGGCGGGCGAAGCCTGCCACGTGCAAGTGGTGTTTTCCACCA
AGAAGGAGCTCCCATCGCTGCTGGTCATAGTGGCAGTGAGCGTATTCCTCCTGGTGCTGGCCACAGTGCC
CCTTCTGGGCGCCGCCTGCTGCCATCTGCTGGCTAAACACCCGGGCAAGCCCTACCGTCTGATCCTGCGG
CCTCAGGCCCCTGACCCTATGGAGAAGCGCATCGCCGCAGACTTCGACCCGCGTGCTTCGTACCTCGAGT
CCGAGAAAAGCTACCCGGCAGGCGGCGAGGCGGGCGGCGAGGAGCCAGAGGACGTGCAGGGGGAGGGCCT
TGATGAAGACGCGGAGCAGGGAGACCCAAGTGGGGACCTGCAGAGAGAGGAGAGCCTGGCGGCCTGCTCA
CTGGTGGAGTCCCAGTCCAAGGCCAACCAAGAGGAGTTCGAGGCGGGCTCTGAGTACAGCGATCGGCTGC
CCCTGGGCGCCGAGGCGGTCAACATCGCCCAGGAGATTAATGGCAACTACAGGCAGACGGCAGGCTGA

Translation (745 aa):
MFPLRALWLVWALLGVAGSCPEPCACVDKYAHQFADCAYKELREVPEGLPANVTTLSLSANKITVLRRGA
FADVTQVTSLWLAHNEVRTVEPGALAVLSQLKNLDLSHNFISSFPWSDLRNLSALQLLKMNHNRLGSLPR
DALGALPDLRSLRINNNRLRTLAPGTFDALSALSHLQLYHNPFHCGCGLVWLQAWAASTRVSLPEPDSIA
CASPPALQGVPVYRLPALPCAPPSVHLSAEPPLEAPGTPLRAGLAFVLHCIADGHPTPRLQWQLQIPGGT
VVLEPPVLSGEDDGVGAEEGEGEGDGDLLTQTQAQTPTPAPAWPAPPATPRFLALANGSLLVPLLSAKEA
GVYTCRAHNELGANSTSIRVAVAATGPPKHAPGAGGEPDGQAPTSERKSTAKGRGNSVLPSKPEGKIKGQ
GLAKVSILGETETEPEEDTSEGEEAEDQILADPAEEQRCGNGDPSRYVSNHAFNQSAELKPHVFELGVIA
LDVAEREARVQLTPLAARWGPGPGGAGGAPRPGRRPLRLLYLCPAGGGAAVQWSRVEEGVNAYWFRGLRP
GTNYSVCLALAGEACHVQVVFSTKKELPSLLVIVAVSVFLLVLATVPLLGAACCHLLAKHPGKPYRLILR
PQAPDPMEKRIAADFDPRASYLESEKSYPAGGEAGGEEPEDVQGEGLDEDAEQGDPSGDLQREESLAACS
LVESQSKANQEEFEAGSEYSDRLPLGAEAVNIAQEINGNYRQTAG


Links Key
 Links to:   History report
  BLAST report
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  Nucleotide report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
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