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Report for CCDS2787.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
2787.1 Public Homo sapiens 3 QRICH1 24 110 108 CCDS HistoryNCBI Gene:54870Re-query CCDS DB by CCDS ID:2787.1Re-query CCDS DB by GeneID:54870See the combined annotation on chromosome 3 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 2787.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000357496.6 ENSP00000350094.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000357496.6Link to Ensembl Protein Viewer:ENSP00000350094.2Re-query CCDS DB by Nucleotide ID:ENST00000357496Re-query CCDS DB by Protein ID:ENSP00000350094
Original member Current member EBI ENST00000395443.7 ENSP00000378830.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000395443.7Link to Ensembl Protein Viewer:ENSP00000378830.2Re-query CCDS DB by Nucleotide ID:ENST00000395443Re-query CCDS DB by Protein ID:ENSP00000378830
Original member Current member EBI ENST00000411682.2 ENSP00000412870.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000411682.2Link to Ensembl Protein Viewer:ENSP00000412870.2Re-query CCDS DB by Nucleotide ID:ENST00000411682Re-query CCDS DB by Protein ID:ENSP00000412870
Original member Current member EBI ENST00000424300.5 ENSP00000412890.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000424300.5Link to Ensembl Protein Viewer:ENSP00000412890.1Re-query CCDS DB by Nucleotide ID:ENST00000424300Re-query CCDS DB by Protein ID:ENSP00000412890
Original member Current member EBI ENST00000703871.1 ENSP00000515516.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000703871.1Link to Ensembl Protein Viewer:ENSP00000515516.1Re-query CCDS DB by Nucleotide ID:ENST00000703871Re-query CCDS DB by Protein ID:ENSP00000515516
Original member Current member EBI ENST00000703942.1 ENSP00000515573.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000703942.1Link to Ensembl Protein Viewer:ENSP00000515573.1Re-query CCDS DB by Nucleotide ID:ENST00000703942Re-query CCDS DB by Protein ID:ENSP00000515573
Original member Current member NCBI NM_001320580.2 NP_001307509.1 Accepted alive Link to Nucleotide Sequence:NM_001320580.2Link to Protein Sequence:NP_001307509.1Re-query CCDS DB by Nucleotide ID:NM_001320580Re-query CCDS DB by Protein ID:NP_001307509Link to BLAST:NP_001307509.1
Original member Current member NCBI NM_001320581.2 NP_001307510.1 Accepted alive Link to Nucleotide Sequence:NM_001320581.2Link to Protein Sequence:NP_001307510.1Re-query CCDS DB by Nucleotide ID:NM_001320581Re-query CCDS DB by Protein ID:NP_001307510Link to BLAST:NP_001307510.1
Original member Current member NCBI NM_001320582.2 NP_001307511.1 Accepted alive Link to Nucleotide Sequence:NM_001320582.2Link to Protein Sequence:NP_001307511.1Re-query CCDS DB by Nucleotide ID:NM_001320582Re-query CCDS DB by Protein ID:NP_001307511Link to BLAST:NP_001307511.1
Original member Current member NCBI NM_001320583.2 NP_001307512.1 Accepted alive Link to Nucleotide Sequence:NM_001320583.2Link to Protein Sequence:NP_001307512.1Re-query CCDS DB by Nucleotide ID:NM_001320583Re-query CCDS DB by Protein ID:NP_001307512Link to BLAST:NP_001307512.1
Original member Current member NCBI NM_001320584.1 NP_001307513.1 Accepted alive Link to Nucleotide Sequence:NM_001320584.1Link to Protein Sequence:NP_001307513.1Re-query CCDS DB by Nucleotide ID:NM_001320584Re-query CCDS DB by Protein ID:NP_001307513Link to BLAST:NP_001307513.1
Original member Current member NCBI NM_001320585.1 NP_001307514.1 Accepted alive Link to Nucleotide Sequence:NM_001320585.1Link to Protein Sequence:NP_001307514.1Re-query CCDS DB by Nucleotide ID:NM_001320585Re-query CCDS DB by Protein ID:NP_001307514Link to BLAST:NP_001307514.1
Original member Current member NCBI NM_017730.4 NP_060200.2 Accepted alive Link to Nucleotide Sequence:NM_017730.4Link to Protein Sequence:NP_060200.2Re-query CCDS DB by Nucleotide ID:NM_017730Re-query CCDS DB by Protein ID:NP_060200Link to BLAST:NP_060200.2
Original member Current member NCBI NM_198880.3 NP_942581.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_198880.3Link to Protein Sequence:NP_942581.1Re-query CCDS DB by Nucleotide ID:NM_198880Re-query CCDS DB by Protein ID:NP_942581Link to BLAST:NP_942581.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001307509.1 776 Q2TAL8 776 100% 0 0
NP_001307510.1 776 Q2TAL8 776 100% 0 0
NP_001307511.1 776 Q2TAL8 776 100% 0 0
NP_001307512.1 776 Q2TAL8 776 100% 0 0
NP_001307513.1 776 Q2TAL8 776 100% 0 0
NP_001307514.1 776 Q2TAL8 776 100% 0 0
NP_060200.2 776 Q2TAL8 776 100% 0 0
NP_942581.1 776 Q2TAL8 776 100% 0 0

Chromosomal Locations for CCDS 2787.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 3 (NC_000003.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3See the combined annotation on chromosome 3 in Sequence Viewer

Chromosome Start Stop Links
3 49030452 49030644 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 49032183 49032273 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 49032622 49032773 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 49033120 49033228 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 49044390 49044504 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 49046425 49046579 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 49047069 49047246 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 49056862 49057890 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 49076709 49077017 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2331 nt):
ATGAATAATTCCCTAGAGAACACCATCTCCTTTGAAGAGTACATCCGAGTAAAGGCACGGTCTGTCCCGC
AA
CACAGGATGAAGGAATTTCTGGACTCACTGGCCTCTAAGGGGCCAGAAGCCCTTCAGGAGTTCCAGCA
G
ACAGCCACCACTACCATGGTGTACCAACAGGGTGGGAACTGCATATACACAGACAGCACTGAAGTGGCT
GGG
TCTTTGCTTGAACTTGCCTGTCCAGTCACCACCAGTGTTCAGCCACAAACCCAGCAAGAACAGCAGA
TC
CAGGTTCAGCAGCCGCAGCAGGTTCAGGTCCAGGTGCAGGTACAGCAGTCTCCGCAACAGGTCTCGGC
T
CAGCTCTCCCCACAACTCACCGTTCACCAGCCTACTGAGCAACCCATCCAGGTCCAGGTGCAGATCCAA
GGC
CAGGCACCACAGTCAGCAGCCCCCTCCATTCAGACCCCGTCTCTGCAGAGTCCCAGTCCCTCGCAGC
TG
CAAGCAGCTCAGATCCAGGTGCAGCACGTGCAAGCAGCCCAGCAGATCCAGGCTGCAGAAATCCCGGA
G
GAGCACATCCCACATCAGCAAATCCAGGCTCAGCTGGTGGCTGGCCAGTCTCTTGCTGGTGGTCAGCAG
ATC
CAAATCCAGACCGTGGGTGCCCTTTCCCCACCACCATCCCAGCAGGGCTCACCCCGGGAAGGGGAGC
GG
CGGGTTGGCACGGCCAGTGTCCTCCAACCAGTGAAGAAGCGCAAAGTGGACATGCCCATCACTGTGTC
C
TACGCCATCTCAGGGCAGCCGGTGGCCACCGTGCTGGCCATTCCACAGGGCCAGCAGCAGAGTTATGTG
TCT
TTGAGGCCAGACTTACTGACAGTAGACAGTGCCCACCTGTACAGTGCCACTGGGACCATTACTAGCC
CT
ACAGGAGAAACCTGGACCATCCCTGTTTATTCTGCCCAGCCCCGGGGGGACCCTCAGCAGCAGAGCAT
T
ACCCACATTGCCATTCCCCAGGAAGCCTACAACGCAGTTCACGTCAGTGGCTCACCCACAGCCCTGGCA
GCT
GTTAAGCTGGAGGATGACAAGGAGAAGATGGTGGGCACCACATCTGTAGTGAAAAACTCCCATGAAG
AG
GTAGTGCAGACCCTTGCAAACTCTCTCTTTCCAGCACAGTTCATGAATGGCAACATCCACATTCCAGT
G
GCTGTGCAGGCTGTGGCAGGCACGTACCAGAATACGGCTCAAACTGTCCATATATGGGACCCCCAACAG
CAG
CCGCAGCAGCAAACTCCCCAGGAACAGACACCACCACCACAGCAGCAGCAGCAGCAACTCCAAGTTA
CT
TGTTCAGCTCAAACTGTCCAGGTTGCTGAAGTTGAACCACAGTCACAGCCACAGCCTTCCCCAGAACT
T
CTGCTTCCAAATTCTTTGAAGCCAGAAGAAGGGCTTGAAGTATGGAAAAACTGGGCCCAGACCAAGAAT
GCT
GAACTAGAGAAGGATGCTCAGAACAGATTGGCACCCATTGGGAGGCGCCAACTGCTGCGATTCCAGG
AA
GATCTCATCTCCTCTGCTGTGGCAGAGTTGAATTATGGGCTCTGTCTAATGACACGGGAAGCTCGAAA
T
GGAGAAGGTGAACCCTATGACCCAGATGTGCTCTACTATATTTTCCTGTGTATTCAAAAGTATCTTTTT
GAA
AATGGAAGGGTAGATGACATTTTCTCCGATCTTTATTATGTTCGGTTCACGGAGTGGCTACATGAAG
TT
CTGAAGGATGTTCAGCCCCGGGTCACTCCACTTGGCTATGTCTTGCCCAGCCACGTGACTGAGGAGAT
G
CTATGGGAGTGCAAGCAGCTTGGGGCTCACTCCCCCTCCACCTTGCTGACCACCCTCATGTTCTTTAAT
ACC
AAGTACTTCCTATTGAAGACAGTGGACCAGCACATGAAGCTGGCCTTCTCCAAGGTCTTGCGACAGA
CA
AAGAAGAACCCCTCTAATCCCAAGGATAAAAGCACGAGTATCCGGTACTTGAAGGCCCTTGGAATACA
C
CAGACTGGCCAGAAAGTTACAGATGACATGTATGCAGAACAGACGGAAAATCCAGAGAATCCATTGAGA
TGT
CCCATCAAGCTCTATGATTTCTACCTCTTCAAATGCCCCCAGAGTGTGAAAGGCCGGAATGACACCT
TT
TACCTGACACCTGAGCCAGTGGTGGCCCCCAACAGCCCAATCTGGTACTCAGTCCAGCCTATCAGCAG
A
GAGCAGATGGGACAAATGCTGACGCGGATCCTGGTGATAAGAGAAATTCAGGAGGCCATCGCAGTGGCC
AAT
GCAAGCACTATGCACTGA


Translation (776 aa):
MNNSLENTISFEEYIRVKARSVPQHRMKEFLDSLASKGPEALQEFQQTATTTMVYQQGGNCIYTDSTEVA
G
SLLELACPVTTSVQPQTQQEQQIQVQQPQQVQ
VQVQVQQSPQQVSAQLSPQLTVHQPTEQPIQVQVQIQ
G
QAPQSAAPSIQTPSLQSPSPSQLQAAQIQVQHVQAAQQIQAAEIPEEHIPHQQIQAQLVAGQSLAGGQQ
I
QIQTVGALSPPPSQQGSPREGERRVGTASVLQPVKKRKVDMPITVSYAISGQPVATVLAIPQGQQQSYV
S
LRPDLLTVDSAHLYSATGTITSPTGETWTIPVYSAQPRGDPQQQSITHIAIPQEAYNAVHVSGSPTALA
A
VKLEDDKEKMVGTTSVVKNSHEEVVQTLANSLFPAQFMNGNIHIPVAVQAVAGTYQNTAQTVHIWDPQQ
Q
PQQQTPQEQTPPPQQQQQQLQVTCS
AQTVQVAEVEPQSQPQPSPELLLPNSLKPEEGLEVWKNWAQTKN
A
ELEKDAQNRLAPIG
RRQLLRFQEDLISSAVAELNYGLCLMTREARNGEGEPYDPDVLYYIFLCIQKYLF
E
NGRVDDIFSDLYYVRFTEWLHEVLKDVQPRVTPL
GYVLPSHVTEEMLWECKQLGAHSPSTLLTTLMFFN
T
KYFLLKTVDQHMKLAFSKVLRQTKKNPSNPKDKSTSIRYLKALGIHQTGQKVTDDMYAEQTENPENPLR
C
PIKLYDFYLFK
CPQSVKGRNDTFYLTPEPVVAPNSPIWYSVQPISREQMGQMLTRILVIREIQEAIAVA
N
ASTMH




Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser