NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq


Report for CCDS87547.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
87547.1 Public Homo sapiens 7 TMEM209 24 110 108 CCDS HistoryNCBI Gene:84928Re-query CCDS DB by CCDS ID:87547.1Re-query CCDS DB by GeneID:84928See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 22, NCBI annotation release 109, Ensembl annotation release 92

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 87547.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000462753.5 ENSP00000419697.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000462753.5Link to Ensembl Protein Viewer:ENSP00000419697.1Re-query CCDS DB by Nucleotide ID:ENST00000462753Re-query CCDS DB by Protein ID:ENSP00000419697
Original member Current member NCBI NM_001363478.2 NP_001350407.1 Accepted alive Link to Nucleotide Sequence:NM_001363478.2Link to Protein Sequence:NP_001350407.1Re-query CCDS DB by Nucleotide ID:NM_001363478Re-query CCDS DB by Protein ID:NP_001350407Link to BLAST:NP_001350407.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001350407.1 560 Q96SK2-2 560 100% 0 0

Chromosomal Locations for CCDS 87547.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 7 (NC_000007.14)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 130166451 130166505 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 130170400 130170473 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 130173632 130173729 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 130173825 130173939 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 130175512 130175609 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 130178402 130178527 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 130181623 130181719 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 130184184 130184255 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 130185192 130185367 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 130192622 130192823 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 130201850 130202091 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 130202532 130202663 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 130203788 130203846 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 130203974 130204110 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1683 nt):
ATGCAGGGGGAGGCACACCCTAGTGCTTCCCTTATTGACAGAACCATCAAGATGAGAAAAGAAACAGAGG
CTAGGAAAGTGGTCTTAGCCTGGGGACTCCTAAATGTATCTATGGCTGGAATGATATATACTGAAATGAC
TGGAAAATTGATTAGTTCATACTACAATGTGACATACTGGCCCCTCTGGTATATTGAGCTTGCCCTTGCA
TCTCTCTTCAGCCTTAATGCCTTATTTGATTTTTGGAGATATTTCAAATATACTGTGGCACCAACAAGTC
TGGTTGTTAGTCCTGGACAGCAAACACTTTTAGGGTTGAAAACAGCTGTTGTACAGACTACGCCTCCACA
TGATCTGGCAGCAACCCAAATCCCTCCCGCTCCACCTTCCCCTTCAATTCAGGGTCAGAGTGTGTTGAGT
TATAGCCCTTCTCGTTCGCCCAGTACCAGTCCCAAGTTCACCACCAGCTGTATGACTGGTTACAGCCCTC
AGCTGCAAGGTCTGTCCTCAGGTGGCAGTGGTTCTTATAGCCCTGGAGTGACCTACTCGCCCGTCAGTGG
TTATAATAAGTTGGCGAGCTTTAGCCCCTCTCCTCCTTCTCCGTACCCTACCACTGTTGGACCAGTGGAG
AGCAGTGGATTGAGATCTCGCTACCGTTCTTCACCTACCGTCTACAACTCACCTACTGACAAAGAAGACT
ACATGACCGACCTACGAACTTTGGATACTTTTCTCAGAAGTGAAGAGGAGAAACAGCATAGGGTTAAGCT
GGGGAGCCCAGATTCTACCTCTCCTTCCAGCAGTCCTACTTTCTGGAACTATAGTCGTTCTATGGGGGAT
TATGCACAAACTTTAAAGAAGTTTCAGTATCAGCTTGCCTGTAGGTCTCAGGCCCCATGTGCTAACAAAG
ATGAAGCCGATCTCAGCTCTAAACAAGCCGCAGAAGAGGTCTGGGCAAGAGTGGCTATGAATAGACAACT
TCTTGATCATATGGATTCATGGACAGCTAAATTTAGAAATTGGATCAATGAGACAATATTAGTGCCACTT
GTTCAAGAGATTGAGTCTGTCAGCACACAGATGAGACGAATGGGTTGTCCAGAGCTACAGATAGGAGAGG
CTAGTATTACTAGCTTGAAACAAGCTGCCCTGGTTAAAGCGCCTCTCATTCCGACTTTGAACACAATCGT
TCAGTATCTAGACCTTACTCCAAATCAGGAATACTTGTTTGAAAGGATCAAAGAACTATCTCAGGGAGGT
TGTATGAGCTCATTTCGATGGAACAGAGGTGGCGACTTCAAAGGACGAAAGTGGGATACAGACCTGCCCA
CCGATTCTGCTATCATCATGCATGTATTTTGCACCTACCTTGATTCCAGATTACCTCCACATCCGAAGTA
TCCCGACGGAAAAACTTTTACTTCTCAGCACTTTGTTCAGACACCAAATAAACCAGATGTTACAAATGAG
AATGTTTTTTGCATTTATCAGAGTGCTATCAACCCTCCCCATTATGAGCTCATCTACCAGCGTCATGTAT
ACAACCTGCCAAAGGGCAGAAATAATATGTTTCATACATTGTTGATGTTTCTCTACATCATAAAGACCAA
AGAGTCAGGAATGCTTGGGAGAGTTAATCTTGGTCTATCTGGTGTGAATATATTGTGGATCTTTGGCGAG
TAG

Translation (560 aa):
MQGEAHPSASLIDRTIKMRKETEARKVVLAWGLLNVSMAGMIYTEMTGKLISSYYNVTYWPLWYIELALA
SLFSLNALFDFWRYFKYTVAPTSLVVSPGQQTLLGLKTAVVQTTPPHDLAATQIPPAPPSPSIQGQSVLS
YSPSRSPSTSPKFTTSCMTGYSPQLQGLSSGGSGSYSPGVTYSPVSGYNKLASFSPSPPSPYPTTVGPVE
SSGLRSRYRSSPTVYNSPTDKEDYMTDLRTLDTFLRSEEEKQHRVKLGSPDSTSPSSSPTFWNYSRSMGD
YAQTLKKFQYQLACRSQAPCANKDEADLSSKQAAEEVWARVAMNRQLLDHMDSWTAKFRNWINETILVPL
VQEIESVSTQMRRMGCPELQIGEASITSLKQAALVKAPLIPTLNTIVQYLDLTPNQEYLFERIKELSQGG
CMSSFRWNRGGDFKGRKWDTDLPTDSAIIMHVFCTYLDSRLPPHPKYPDGKTFTSQHFVQTPNKPDVTNE
NVFCIYQSAINPPHYELIYQRHVYNLPKGRNNMFHTLLMFLYIIKTKESGMLGRVNLGLSGVNILWIFGE


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH