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Report for CCDS8443.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
8443.1 Public Homo sapiens 11 ZNF202 24 110 108 CCDS HistoryNCBI Gene:7753Re-query CCDS DB by CCDS ID:8443.1Re-query CCDS DB by GeneID:7753See the combined annotation on chromosome 11 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 8443.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000336139.8 ENSP00000337724.4 Accepted alive Link to Ensembl Transcript Viewer:ENST00000336139.8Link to Ensembl Protein Viewer:ENSP00000337724.4Re-query CCDS DB by Nucleotide ID:ENST00000336139Re-query CCDS DB by Protein ID:ENSP00000337724
Original member Current member EBI ENST00000530393.6 ENSP00000432504.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000530393.6Link to Ensembl Protein Viewer:ENSP00000432504.1Re-query CCDS DB by Nucleotide ID:ENST00000530393Re-query CCDS DB by Protein ID:ENSP00000432504
Original member Current member EBI ENST00000529691.1 ENSP00000433881.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000529691.1Link to Ensembl Protein Viewer:ENSP00000433881.1Re-query CCDS DB by Nucleotide ID:ENST00000529691Re-query CCDS DB by Protein ID:ENSP00000433881
Original member Current member NCBI NM_001301779.2 NP_001288708.1 Accepted alive Link to Nucleotide Sequence:NM_001301779.2Link to Protein Sequence:NP_001288708.1Re-query CCDS DB by Nucleotide ID:NM_001301779Re-query CCDS DB by Protein ID:NP_001288708Link to BLAST:NP_001288708.1
Original member Current member NCBI NM_001301780.2 NP_001288709.1 Accepted alive Link to Nucleotide Sequence:NM_001301780.2Link to Protein Sequence:NP_001288709.1Re-query CCDS DB by Nucleotide ID:NM_001301780Re-query CCDS DB by Protein ID:NP_001288709Link to BLAST:NP_001288709.1
Original member Current member NCBI NM_003455.4 NP_003446.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_003455.4Link to Protein Sequence:NP_003446.2Re-query CCDS DB by Nucleotide ID:NM_003455Re-query CCDS DB by Protein ID:NP_003446Link to BLAST:NP_003446.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001288708.1 648 O95125-1 648 100% 0 0
NP_001288709.1 648 O95125-1 648 100% 0 0
NP_003446.2 648 O95125-1 648 100% 0 0

Chromosomal Locations for CCDS 8443.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 11 (NC_000011.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11See the combined annotation on chromosome 11 in Sequence Viewer

Chromosome Start Stop Links
11 123725997 123726991 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 123727476 123727595 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 123728133 123728262 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 123729126 123729214 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 123729615 123729825 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 123730487 123730888 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1947 nt):
ATGGCTACAGCCGTGGAACCAGAGGACCAGGATCTTTGGGAAGAAGAGGGAATTCTGATGGTGAAACTGG
AAGATGATTTCACCTGTCGGCCAGAGTCTGTCTTACAGAGGGATGACCCGGTGCTGGAAACCTCCCACCA
GAACTTCCGACGCTTCCGCTACCAGGAGGCAGCAAGCCCTAGAGAAGCTCTCATCAGACTCCGAGAACTT
TGTCACCAGTGGCTGAGACCAGAGAGGCGGACAAAGGAGCAGATCCTAGAGCTGCTTGTGCTGGAACAAT
TTCTTACCGTCCTACCTGGAGAACTACAGAGCTGGGTGCGGGGCCAACGGCCAGAAAGTGGCGAGGAGGC
AGTGACGCTGGTGGAGGGTTTGCAGAAACAACCCAGGAGACCAAGGCGGTGGGTGACTGTCCATGTTCAC
GGCCAGGAAGTCCTGTCAGAGGAGACGGTGCATTTAGGAGTGGAGCCTGAGTCACCTAATGAGCTGCAGG
ATCCTGTGCAAAGCTCGACCCCCGAGCAGTCTCCTGAGGAAACCACACAGAGCCCAGATCTGGGGGCACC
GGCAGAGCAGCGTCCACACCAGGAAGAGGAGCTCCAGACCCTGCAGGAGAGCGAGGTCCCAGTGCCCGAG
GACCCAGACCTTCCTGCAGAGAGGAGCTCTGGAGACTCAGAGATGGTTGCTCTTCTTACTGCTCTGTCAC
AGGGACTGGTAACGTTCAAGGATGTGGCCGTATGCTTTTCCCAGGACCAGTGGAGTGATCTGGACCCAAC
ACAGAAAGAGTTCTATGGAGAATATGTCTTGGAAGAAGACTGTGGAATTGTTGTCTCTCTGTCATTTCCA
ATCCCCAGACCTGATGAGATCTCCCAGGTTAGAGAGGAAGAGCCTTGGGTCCCAGATATCCAAGAGCCTC
AGGAGACTCAAGAGCCAGAAATCCTGAGTTTTACCTACACAGGAGATAGGAGTAAAGATGAGGAAGAGTG
TCTGGAGCAGGAAGATCTGAGTTTGGAGGATATACACAGGCCTGTTTTGGGAGAACCAGAAATTCACCAG
ACTCCAGATTGGGAAATAGTCTTTGAGGACAATCCAGGTAGACTTAATGAAAGAAGATTTGGTACTAATA
TTTCTCAAGTGAATAGTTTTGTGAACCTTCGGGAAACTACACCCGTCCACCCCCTGTTAGGGAGGCATCA
TGACTGTTCTGTGTGTGGAAAGAGCTTCACTTGTAACTCCCACCTTGTTAGACACCTGAGGACTCACACA
GGAGAGAAACCCTATAAATGTATGGAATGTGGAAAAAGTTACACACGAAGCTCACATCTTGCCAGGCACC
AAAAGGTTCACAAGATGAACGCGCCTTACAAATATCCCCTAAACCGGAAGAATTTGGAAGAGACCTCCCC
TGTGACACAGGCTGAGAGAACTCCATCAGTGGAGAAACCCTATAGATGTGATGATTGCGGAAAGCACTTC
CGCTGGACTTCAGACCTTGTCAGACATCAGAGGACACATACTGGAGAAAAACCCTTCTTTTGTACTATTT
GTGGCAAAAGCTTCAGCCAGAAATCTGTGTTAACAACACACCAAAGAATCCACCTGGGAGGCAAACCCTA
CTTGTGTGGAGAGTGTGGTGAGGACTTCAGTGAACACAGGCGGTACCTGGCGCACCGGAAGACGCACGCT
GCTGAGGAACTCTACCTCTGCAGCGAGTGCGGGCGCTGCTTCACCCACAGCGCAGCGTTCGCCAAGCACT
TGAGAGGACACGCCTCAGTGAGGCCCTGCCGATGCAACGAATGTGGGAAGAGCTTCAGTCGCAGGGACCA
CCTCGTCAGGCATCAGAGAACACACACTGGGGAGAAACCATTCACGTGCCCTACCTGTGGAAAAAGCTTC
AGCAGAGGATATCACTTAATTAGGCATCAGAGGACCCACTCAGAAAAGACCTCCTAG

Translation (648 aa):
MATAVEPEDQDLWEEEGILMVKLEDDFTCRPESVLQRDDPVLETSHQNFRRFRYQEAASPREALIRLREL
CHQWLRPERRTKEQILELLVLEQFLTVLPGELQSWVRGQRPESGEEAVTLVEGLQKQPRRPRRWVTVHVH
GQEVLSEETVHLGVEPESPNELQDPVQSSTPEQSPEETTQSPDLGAPAEQRPHQEEELQTLQESEVPVPE
DPDLPAERSSGDSEMVALLTALSQGLVTFKDVAVCFSQDQWSDLDPTQKEFYGEYVLEEDCGIVVSLSFP
IPRPDEISQVREEEPWVPDIQEPQETQEPEILSFTYTGDRSKDEEECLEQEDLSLEDIHRPVLGEPEIHQ
TPDWEIVFEDNPGRLNERRFGTNISQVNSFVNLRETTPVHPLLGRHHDCSVCGKSFTCNSHLVRHLRTHT
GEKPYKCMECGKSYTRSSHLARHQKVHKMNAPYKYPLNRKNLEETSPVTQAERTPSVEKPYRCDDCGKHF
RWTSDLVRHQRTHTGEKPFFCTICGKSFSQKSVLTTHQRIHLGGKPYLCGECGEDFSEHRRYLAHRKTHA
AEELYLCSECGRCFTHSAAFAKHLRGHASVRPCRCNECGKSFSRRDHLVRHQRTHTGEKPFTCPTCGKSF
SRGYHLIRHQRTHSEKTS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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