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Report for CCDS74245.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
74245.1 Public Homo sapiens 19 CIRBP 24 110 108 CCDS HistoryNCBI Gene:1153Re-query CCDS DB by CCDS ID:74245.1Re-query CCDS DB by GeneID:1153See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 17, NCBI annotation release 106, Ensembl annotation release 76

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 74245.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000587323.5 ENSP00000465077.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000587323.5Link to Ensembl Protein Viewer:ENSP00000465077.1Re-query CCDS DB by Nucleotide ID:ENST00000587323Re-query CCDS DB by Protein ID:ENSP00000465077
Original member Current member EBI ENST00000588230.5 ENSP00000465558.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000588230.5Link to Ensembl Protein Viewer:ENSP00000465558.1Re-query CCDS DB by Nucleotide ID:ENST00000588230Re-query CCDS DB by Protein ID:ENSP00000465558
Original member Current member EBI ENST00000587896.6 ENSP00000466025.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000587896.6Link to Ensembl Protein Viewer:ENSP00000466025.1Re-query CCDS DB by Nucleotide ID:ENST00000587896Re-query CCDS DB by Protein ID:ENSP00000466025
Original member Current member EBI ENST00000589710.5 ENSP00000466897.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000589710.5Link to Ensembl Protein Viewer:ENSP00000466897.1Re-query CCDS DB by Nucleotide ID:ENST00000589710Re-query CCDS DB by Protein ID:ENSP00000466897
Original member Current member EBI ENST00000628979.2 ENSP00000486590.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000628979.2Link to Ensembl Protein Viewer:ENSP00000486590.1Re-query CCDS DB by Nucleotide ID:ENST00000628979Re-query CCDS DB by Protein ID:ENSP00000486590
Original member Current member NCBI NM_001300829.2 NP_001287758.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001300829.2Link to Protein Sequence:NP_001287758.1Re-query CCDS DB by Nucleotide ID:NM_001300829Re-query CCDS DB by Protein ID:NP_001287758Link to BLAST:NP_001287758.1

Chromosomal Locations for CCDS 74245.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 19 (NC_000019.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 1270934 1271036 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 1271140 1271246 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 1271329 1271467 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 1271551 1271632 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 1271981 1272443 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (894 nt):
ATGGCATCAGATGAAGGCAAACTTTTTGTTGGAGGGCTGAGTTTTGACACCAATGAGCAGTCGCTGGAGC
AGGTCTTCTCAAAGTACGGACAGATCTCTGAAGTGGTGGTTGTGAAAGACAGGGAGACCCAGAGATCTCG
GGGATTTGGGTTTGTCACCTTTGAGAACATTGACGACGCTAAGGATGCCATGATGGCCATGAATGGGAAG
TCTGTAGATGGACGGCAGATCCGAGTAGACCAGGCAGGCAAGTCGTCAGACAACCGATCCCGTGGGTACC
GTGGTGGCTCTGCCGGGGGCCGGGGCTTCTTCCGTGGGGGCCGAGGACGGGGCCGTGGGTTCTCTAGAGG
AGGAGGGGACCGAGGCTATGGGGGGAACCGGTTCGAGTCCAGGAGTGGGGGCTACGGAGGCTCCAGAGAC
TACTATAGCAGCCGGAGTCAGAGTGGTGGCTACAGTGACCGGAGCTCGGGCGGGTCCTACAGAGACAGTT
ATGACAGTTACGGTAAGTCACACTCCGAGGGCGCCACGCTGCTGTGGCCTGCGGTGGGAGCTCGGTTCAC
CTTGGTGCCCTCTCCAAGCACTTTAGGCTGGACACTCAGACCTTGTCACTGTGCTTGCCCAGAAGAGGCG
CATCTGTCCTCTCAGAGCCATTTCTATCGCAGGACGCAAAAGCCAAATGAGACTGACCAAAAAGGCAAGG
GAGAGCGAGGGCCCGCTGGGCAGTCAGCTAGGTGCATGTGTGGCCGCAGGCCAGCCTCCCTCGGCTGTGG
GGGGTGGTTGCTCCCCGGCCGCAGGCCGCGCCCTGGTCTGGCCTCTGGGGTGAAGCTGCCTCTTGTTGCT
TCGGTGCCTTTACACTGTGCCTGCTTCTTGTCCTCAGCTACACACAACGAGTAA

Translation (297 aa):
MASDEGKLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAMNGK
SVDGRQIRVDQAGKSSDNRSRGYRGGSAGGRGFFRGGRGRGRGFSRGGGDRGYGGNRFESRSGGYGGSRD
YYSSRSQSGGYSDRSSGGSYRDSYDSYGKSHSEGATLLWPAVGARFTLVPSPSTLGWTLRPCHCACPEEA
HLSSQSHFYRRTQKPNETDQKGKGERGPAGQSARCMCGRRPASLGCGGWLLPGRRPRPGLASGVKLPLVA
SVPLHCACFLSSATHNE


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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