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Report for CCDS73715.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
73715.1 Public Homo sapiens 15 FRMD5 24 110 108 CCDS HistoryNCBI Gene:84978Re-query CCDS DB by CCDS ID:73715.1Re-query CCDS DB by GeneID:84978See the combined annotation on chromosome 15 in Sequence Viewer

Public since: CCDS release 17, NCBI annotation release 106, Ensembl annotation release 76

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 73715.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000618556.4 ENSP00000479575.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000618556.4Link to Ensembl Protein Viewer:ENSP00000479575.1Re-query CCDS DB by Nucleotide ID:ENST00000618556Re-query CCDS DB by Protein ID:ENSP00000479575
Original member Current member NCBI NM_001286491.2 NP_001273420.1 Accepted alive Link to Nucleotide Sequence:NM_001286491.2Link to Protein Sequence:NP_001273420.1Re-query CCDS DB by Nucleotide ID:NM_001286491Re-query CCDS DB by Protein ID:NP_001273420Link to BLAST:NP_001273420.1

Chromosomal Locations for CCDS 73715.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 15 (NC_000015.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15See the combined annotation on chromosome 15 in Sequence Viewer

Chromosome Start Stop Links
15 43873885 43874462 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 43883703 43883809 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 43884727 43884795 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 43885681 43885755 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 43888175 43888266 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 43888809 43888872 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 43902175 43902200 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1011 nt):
ATGGAGTGGATCCTCACCCATGTAAGGAATGAGGTGACCAAGCTGAAATTTGAAGGAAAGACTTTCTATT
TATACGTAAGTCAGAAAGAGGAAAAGAAAATTATTCTTACATATTTTGCTCCAACTCCTGAAGCGTGTAA
GCACCTCTGGAAATGTGGAATCGAGAACCAAGCCTTCTACAAGCTGGAGAAGTCAAGCCAAGTCCGCACA
GTGTCCAGCAGCAATTTATTCTTTAAAGGGAGCCGGTTCCGATACAGTGGCCGAGTTGCAAAGGAAGTCA
TGGAATCAAGTGCTAAGATCAAACGGGAGCCACCGGAAATACACAGAGCAGGGATGGTTCCCAGCCGGAG
CTGTCCCTCCATAACCCATGGCCCAAGGCTGAGCAGCGTCCCCAGGACCCGCAGAAGAGCTGTTCACATC
TCCATCATGGAAGGCCTAGAGTCCTTACGGGACAGTGCCCATTCCACACCAGTGCGTTCCACTTCCCATG
GGGACACCTTCCTGCCTCACGTGAGAAGCAGCCGGACAGATAGCAATGAGCGAGTAGCTGTGATTGCAGA
CGAGGCCTACAGCCCTGCAGACAGCGTGCTGCCCACCCCTGTGGCTGAGCACAGCCTGGAGCTGATGTTG
CTTTCCCGGCAGATCAATGGAGCCACCTGCAGCATTGAGGAGGAGAAGGAATCTGAAGCCAGCACCCCAA
CTGCTACAGAGGTGGAGGCCCTTGGGGGAGAGCTGAGGGCCCTGTGTCAGGGGCACAGCGGGCCCGAGGA
GGAACAGGTGAATAAGTTTGTTCTAAGTGTCCTCCGTTTGCTCCTTGTGACCATGGGACTCCTCTTTGTT
TTGCTCCTCCTCCTGATCATCCTTACCGAGTCTGACCTTGACATTGCCTTTTTCCGTGATATCCGCCAGA
CCCCCGAGTTTGAACAATTCCACTATCAATACTTTTGTCCCCTCAGGCGATGGTTTGCCTGCAAAATCCG
CTCAGTGGTGAGCCTGCTCATTGACACCTGA

Translation (336 aa):
MEWILTHVRNEVTKLKFEGKTFYLYVSQKEEKKIILTYFAPTPEACKHLWKCGIENQAFYKLEKSSQVRT
VSSSNLFFKGSRFRYSGRVAKEVMESSAKIKREPPEIHRAGMVPSRSCPSITHGPRLSSVPRTRRRAVHI
SIMEGLESLRDSAHSTPVRSTSHGDTFLPHVRSSRTDSNERVAVIADEAYSPADSVLPTPVAEHSLELML
LSRQINGATCSIEEEKESEASTPTATEVEALGGELRALCQGHSGPEEEQVNKFVLSVLRLLLVTMGLLFV
LLLLLIILTESDLDIAFFRDIRQTPEFEQFHYQYFCPLRRWFACKIRSVVSLLIDT


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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