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Report for CCDS32269.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
32269.1 Public Homo sapiens 15 PCLAF 24 110 108 CCDS HistoryNCBI Gene:9768Re-query CCDS DB by CCDS ID:32269.1Re-query CCDS DB by GeneID:9768See the combined annotation on chromosome 15 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 32269.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000380258.6 ENSP00000369608.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000380258.6Link to Ensembl Protein Viewer:ENSP00000369608.2Re-query CCDS DB by Nucleotide ID:ENST00000380258Re-query CCDS DB by Protein ID:ENSP00000369608
Original member Current member EBI ENST00000635605.1 ENSP00000489289.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000635605.1Link to Ensembl Protein Viewer:ENSP00000489289.1Re-query CCDS DB by Nucleotide ID:ENST00000635605Re-query CCDS DB by Protein ID:ENSP00000489289
Original member Current member NCBI NM_001029989.3 NP_001025160.1 Accepted alive Link to Nucleotide Sequence:NM_001029989.3Link to Protein Sequence:NP_001025160.1Re-query CCDS DB by Nucleotide ID:NM_001029989Re-query CCDS DB by Protein ID:NP_001025160Link to BLAST:NP_001025160.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001025160.1 65 Q15004-2 65 100% 0 0

Chromosomal Locations for CCDS 32269.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 15 (NC_000015.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15See the combined annotation on chromosome 15 in Sequence Viewer

Chromosome Start Stop Links
15 64366005 64366075 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 64380958 64381038 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 64381326 64381371 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (198 nt):
ATGGTGCGGACTAAAGCAGACAGTGTTCCAGGCACTTACAGAAAAGTGGTGGCTGCTCGAGCCCCCAGAA
AGGTGCTTGGTTCTTCCACCTCTGCCACTAATTCGACATCAGTTTCATCGAGGAAAGAGCATGTCCTTTG
CAACCTGATCACACAAATGATGAAAAAGAATAGAACTTTCTCATTCATCTTTGAATAA

Translation (65 aa):
MVRTKADSVPGTYRKVVAARAPRKVLGSSTSATNSTSVSSRKEHVLCNLITQMMKKNRTFSFIFE


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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