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Report for CCDS56515.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
56515.1 Public Homo sapiens 7 OR2A42 24 110 108 CCDS HistoryNCBI Gene:402317Re-query CCDS DB by CCDS ID:56515.1Re-query CCDS DB by GeneID:402317See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 9, NCBI annotation release 37.3, Ensembl annotation release 64

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 56515.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000641810.1 ENSP00000493333.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000641810.1Link to Ensembl Protein Viewer:ENSP00000493333.1Re-query CCDS DB by Nucleotide ID:ENST00000641810Re-query CCDS DB by Protein ID:ENSP00000493333
Original member Current member NCBI NM_001001802.3 NP_001001802.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001001802.3Link to Protein Sequence:NP_001001802.2Re-query CCDS DB by Nucleotide ID:NM_001001802Re-query CCDS DB by Protein ID:NP_001001802Link to BLAST:NP_001001802.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001001802.2 310 Q8NGT9 310 100% 0 0

Chromosomal Locations for CCDS 56515.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 7 (NC_000007.14)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 144231911 144232843 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (933 nt):
ATGGGGGAAAATCAGACAATGGTCACAGAGTTCCTCCTACTGGGATTTCTCCTGGGCCCAAGGATTCAGA
TGCTCCTCTTTGGGCTCTTCTCCCTGTTCTATATCTTCACCCTGCTGGGGAACGGGGCCATCCTGGGGCT
CATCTCACTGGACTCCAGACTCCACACCCCCATGTACTTCTTCCTCTCACACCTGGCTGTCGTCGACATC
GCCTACACCCGCAACACGGTGCCCCAGATGCTGGCGAACCTCCTGCATCCAGCCAAGCCCATCTCCTTTG
CTGGTTGCATGACGCAGACCTTTCTCTGTTTGAGTTTTGGACACAGCGAATGTCTCCTGCTGGTGCTGAT
GTCCTACGATCGTTACGTGGCCATCTGCCACCCTCTCCGATACTCCGTCATCATGACCTGGAGAGTCTGC
ATCACCCTGGCCGTCACTTCCTGGACGTGTGGCTCCCTCCTGGCTCTGGCCCATGTGGTTCTCATCCTAA
GACTGCCCTTCTCTGGGCCTCATGAAATCAACCACTTCTTCTGTGAAATCCTGTCTGTCCTCAGGCTGGC
CTGTGCTGACACCTGGCTCAACCAGGTGGTCATCTTTGCAGCCTGCGTGTTCTTCCTGGTGGGGCCACCC
AGCCTGGTGCTTGTCTCCTACTCGCACATCCTGGCGGCCATCCTGAGGATCCAGTCTGGGGAGGGCCGCA
GAAAGGCCTTCTCCACCTGCTCCTCCCACCTCTGCGTGGTGGGACTCTTCTTTGGCAGTGCCATCATCAT
GTACATGGCCCCCAAGTCCCGCCATCCTGAGGAGCAGCAAAAGGTCTTTTTTCTATTTTACAGTTTTTTC
AACCCAACACTTAACCCCCTGATTTACAGCCTGAGGAACGGAGAGGTCAAGGGTGCCCTGAGGAGAGCAC
TGGGCAAGGAAAGTCATTCCTAA

Translation (310 aa):
MGENQTMVTEFLLLGFLLGPRIQMLLFGLFSLFYIFTLLGNGAILGLISLDSRLHTPMYFFLSHLAVVDI
AYTRNTVPQMLANLLHPAKPISFAGCMTQTFLCLSFGHSECLLLVLMSYDRYVAICHPLRYSVIMTWRVC
ITLAVTSWTCGSLLALAHVVLILRLPFSGPHEINHFFCEILSVLRLACADTWLNQVVIFAACVFFLVGPP
SLVLVSYSHILAAILRIQSGEGRRKAFSTCSSHLCVVGLFFGSAIIMYMAPKSRHPEEQQKVFFLFYSFF
NPTLNPLIYSLRNGEVKGALRRALGKESHS


Links Key
 Links to:   History report
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  Nucleotide report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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