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Report for CCDS13273.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
13273.1 Public Homo sapiens 20 AAR2 24 110 108 CCDS HistoryNCBI Gene:25980Re-query CCDS DB by CCDS ID:13273.1Re-query CCDS DB by GeneID:25980See the combined annotation on chromosome 20 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 13273.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000320849.9 ENSP00000313674.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000320849.9Link to Ensembl Protein Viewer:ENSP00000313674.4Re-query CCDS DB by Nucleotide ID:ENST00000320849Re-query CCDS DB by Protein ID:ENSP00000313674
Original member Current member EBI ENST00000373932.3 ENSP00000363043.3 Accepted alive Link to Ensembl Transcript Viewer:ENST00000373932.3Link to Ensembl Protein Viewer:ENSP00000363043.3Re-query CCDS DB by Nucleotide ID:ENST00000373932Re-query CCDS DB by Protein ID:ENSP00000363043
Original member Current member EBI ENST00000680933.1 ENSP00000505061.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000680933.1Link to Ensembl Protein Viewer:ENSP00000505061.1Re-query CCDS DB by Nucleotide ID:ENST00000680933Re-query CCDS DB by Protein ID:ENSP00000505061
Original member Current member EBI ENST00000680247.1 ENSP00000505295.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000680247.1Link to Ensembl Protein Viewer:ENSP00000505295.1Re-query CCDS DB by Nucleotide ID:ENST00000680247Re-query CCDS DB by Protein ID:ENSP00000505295
Original member Current member EBI ENST00000680639.1 ENSP00000505405.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000680639.1Link to Ensembl Protein Viewer:ENSP00000505405.1Re-query CCDS DB by Nucleotide ID:ENST00000680639Re-query CCDS DB by Protein ID:ENSP00000505405
Original member Current member EBI ENST00000680811.1 ENSP00000506185.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000680811.1Link to Ensembl Protein Viewer:ENSP00000506185.1Re-query CCDS DB by Nucleotide ID:ENST00000680811Re-query CCDS DB by Protein ID:ENSP00000506185
Original member Current member EBI ENST00000679667.1 ENSP00000506354.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000679667.1Link to Ensembl Protein Viewer:ENSP00000506354.1Re-query CCDS DB by Nucleotide ID:ENST00000679667Re-query CCDS DB by Protein ID:ENSP00000506354
Original member Current member NCBI NM_001271874.2 NP_001258803.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001271874.2Link to Protein Sequence:NP_001258803.1Re-query CCDS DB by Nucleotide ID:NM_001271874Re-query CCDS DB by Protein ID:NP_001258803Link to BLAST:NP_001258803.1
Original member Current member NCBI NM_015511.5 NP_056326.2 Accepted alive Link to Nucleotide Sequence:NM_015511.5Link to Protein Sequence:NP_056326.2Re-query CCDS DB by Nucleotide ID:NM_015511Re-query CCDS DB by Protein ID:NP_056326Link to BLAST:NP_056326.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001258803.1 384 Q9Y312 384 100% 0 0
NP_056326.2 384 Q9Y312 384 100% 0 0

Chromosomal Locations for CCDS 13273.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 20 (NC_000020.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20See the combined annotation on chromosome 20 in Sequence Viewer

Chromosome Start Stop Links
20 36239869 36240625 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20
20 36244697 36244926 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20
20 36255578 36255745 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1155 nt):
ATGGCTGCCGTGCAGATGGATCCTGAGCTAGCCAAGCGCCTCTTCTTTGAAGGGGCCACTGTGGTCATCC
TGAACATGCCCAAGGGAACAGAGTTTGGGATTGACTATAACTCCTGGGAGGTCGGGCCCAAGTTCCGGGG
CGTGAAGATGATCCCTCCAGGCATCCACTTCCTCCACTACAGCTCTGTGGACAAGGCTAATCCGAAGGAA
GTAGGCCCTCGTATGGGTTTCTTCCTTAGCCTGCACCAGCGGGGGCTGACAGTGCTGCGCTGGAGCACAC
TCAGGGAAGAGGTAGACCTGTCCCCAGCCCCAGAGTCTGAGGTGGAGGCCATGAGGGCCAACCTCCAGGA
GCTGGACCAGTTCCTGGGGCCTTACCCATATGCCACCCTGAAGAAGTGGATCTCACTCACCAACTTCATC
AGCGAAGCCACAGTGGAGAAGCTACAGCCCGAGAATCGACAGATCTGTGCCTTTTCCGATGTGCTACCTG
TGCTCTCCATGAAGCACACCAAGGACCGCGTGGGGCAGAATCTACCCCGCTGTGGCATTGAGTGCAAAAG
CTACCAAGAGGGCCTGGCCCGGCTACCAGAGATGAAGCCCAGAGCCGGGACAGAGATCCGCTTCTCAGAG
CTGCCCACGCAGATGTTCCCAGAGGGTGCCACGCCAGCTGAGATAACCAAGCACAGCATGGACCTGAGCT
ATGCCCTGGAGACTGTGCTCAACAAGCAGTTCCCCAGCAGCCCCCAGGATGTGCTTGGTGAACTCCAGTT
TGCTTTTGTGTGCTTCCTGCTGGGGAATGTGTACGAGGCATTTGAGCATTGGAAGCGGCTCCTGAACCTC
CTGTGCCGGTCAGAAGCAGCCATGATGAAGCACCACACCCTCTACATCAACCTCATCTCCATCCTGTACC
ACCAGCTTGGTGAGATCCCCGCTGACTTCTTCGTAGACATTGTCTCCCAAGACAACTTCCTCACCAGCAC
CTTACAGGTTTTCTTTTCCTCTGCCTGCAGCATTGCCGTGGATGCCACCCTGAGAAAGAAAGCTGAAAAG
TTCCAAGCTCACCTGACCAAGAAGTTCCGGTGGGACTTTGCTGCGGAACCTGAGGACTGTGCCCCGGTGG
TGGTGGAGCTCCCTGAGGGCATCGAGATGGGCTAA

Translation (384 aa):
MAAVQMDPELAKRLFFEGATVVILNMPKGTEFGIDYNSWEVGPKFRGVKMIPPGIHFLHYSSVDKANPKE
VGPRMGFFLSLHQRGLTVLRWSTLREEVDLSPAPESEVEAMRANLQELDQFLGPYPYATLKKWISLTNFI
SEATVEKLQPENRQICAFSDVLPVLSMKHTKDRVGQNLPRCGIECKSYQEGLARLPEMKPRAGTEIRFSE
LPTQMFPEGATPAEITKHSMDLSYALETVLNKQFPSSPQDVLGELQFAFVCFLLGNVYEAFEHWKRLLNL
LCRSEAAMMKHHTLYINLISILYHQLGEIPADFFVDIVSQDNFLTSTLQVFFSSACSIAVDATLRKKAEK
FQAHLTKKFRWDFAAEPEDCAPVVVELPEGIEMG


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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