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Report for CCDS91313.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
91313.1 Public Homo sapiens 10 HPS1 24 110 108 CCDS HistoryNCBI Gene:3257Re-query CCDS DB by CCDS ID:91313.1Re-query CCDS DB by GeneID:3257See the combined annotation on chromosome 10 in Sequence Viewer

Public since: CCDS release 24, NCBI annotation release 110, Ensembl annotation release 108

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 91313.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000699112.1 ENSP00000514137.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000699112.1Link to Ensembl Protein Viewer:ENSP00000514137.1Re-query CCDS DB by Nucleotide ID:ENST00000699112Re-query CCDS DB by Protein ID:ENSP00000514137
Original member Current member NCBI NM_001322482.2 NP_001309411.1 Accepted alive Link to Nucleotide Sequence:NM_001322482.2Link to Protein Sequence:NP_001309411.1Re-query CCDS DB by Nucleotide ID:NM_001322482Re-query CCDS DB by Protein ID:NP_001309411Link to BLAST:NP_001309411.1

Chromosomal Locations for CCDS 91313.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 10 (NC_000010.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10See the combined annotation on chromosome 10 in Sequence Viewer

Chromosome Start Stop Links
10 98417564 98417726 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 98418175 98418257 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 98420045 98420158 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 98422369 98422513 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 98423603 98423668 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 98423753 98423887 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 98424313 98424374 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 98425541 98425720 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 98425818 98425985 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 98427215 98427264 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 98429573 98429642 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 98430571 98430670 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 98433940 98434091 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 98435635 98435772 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 98443124 98443240 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1743 nt):
ATGAAGTGCGTCTTGGTGGCCACTGAGGGCGCAGAGGTCCTCTTCTACTGGACAGATCAGGAGTTTGAAG
AGAGTCTCCGGCTGAAGTTCGGGCAGTCAGAGAATGAGGAAGAAGAGCTCCCTGCCCTGGAGGACCAGCT
CAGCACCCTCCTAGCCCCGGTCATCATCTCCTCCATGACGATGCTGGAGAAGCTCTCGGACACCTACACC
TGCTTCTCCACGGAAAATGGCAACTTCCTGTATGTCCTTCACCTGGCTGCGGCCCCCAGACCTGGCGCAG
CGTGTCCAGCTGTGGGAGCACTTCCAGAGCCTGCTGTGGACCTACAGCCGCCTGCGGGAGCAGGAGCAGT
GCTTCGCCGTGGAGGTGACTACTGGGCGCGGGAGTCCTCAGGACTTGAAGCTGTCAGCCACAGTGCCAGC
TCCCTGCGCCCGGCCGACCTGCTTGCCCTCATCCTCCTGGTTCAGGACCTCTACCCCAGCGAGAGCACAG
CAGAGGACGACATTCAGGAGACAGACAGCTTCTCCCTCCCTGAGGAGTACTTCACACCAGCTCCTTCCCC
TGGCGATCAGAGCTCAGGTAGCACCATCTGGCTGGAGGGGGGCACCCCCCCCATGGATGCCCTTCAGATA
GCAGAGGACACCCTCCAAACACTGGTTCCCCACTGCCCTGTGCCTTCCGGCCCCAGAAGGATCTTCCTGG
ATGCCAACGTGAAGGAAAGCTACTGCCCCCTAGTGCCCCACACCATGTACTGCCTGCCCCTGTGGCAGGG
CATCAACCTGGTGCTCCTGACCAGGAGCCCCAGCGCGCCCCTGGCCCTGGTTCTGTCCCAGCTGATGGAT
GGCTTCTCCATGCTGGAGAAGAAGCTGAAGGAAGGGCCGGAGCCCGGGGCCTCCCTGCGCTCCCAGCCCC
TCGTGGGAGACCTGCGCCAGAGGATGGACAAGTTTGTCAAGAATCGAGGGGCACAGGAGATTCAGAGCAC
CTGGCTGGAGTTTAAGGCCAAGGCTTTCTCCAAAAGTGAGCCCGGATCCTCCTGGGAGCTGCTCCAGGCA
TGTGGGAAGCTGAAGCGGCAGCTCTGCGCCATCTACCGGCTGAACTTTCTGACCACAGCCCCCAGCAGGG
GAGGCCCACACCTGCCCCAGCACCTGCAGGACCAAGTGCAGAGGCTCATGCGGGAGAAGCTGACGGACTG
GAAGGACTTCTTGCTGGTGAAGAGCAGGAGGAACATCACCATGGTGTCCTACCTAGAAGACTTCCCAGGC
TTGGTGCACTTCATCTATGTGGACCGCACCACTGGGCAGATGGTGGCGCCTTCCCTCAACTGCAGTCAAA
AGACCTCGTCGGAGTTGGGCAAGGGGCCGCTGGCTGCCTTTGTCAAAACTAAGGTCTGGTCTCTGATCCA
GCTGGCGCGCAGATACCTGCAGAAGGGCTACACCACGCTGCTGTTCCAGGAGGGGGATTTCTACTGCTCC
TACTTCCTGTGGTTCGAGAATGACATGGGGTACAAACTCCAGATGATCGAGGTGCCCGTCCTCTCCGACG
ACTCAGTGCCTATCGGCATGCTGGGAGGAGACTACTACAGGAAGCTCCTGCGCTACTACAGCAAGAACCG
CCCAACCGAGGCTGTCAGGTGCTACGAGCTGCTGGCCCTGCACCTGTCTGTCATCCCCACTGACCTGCTG
GTGCAGCAGGCCGGCCAGCTGGCCCGGCGCCTCTGGGAGGCCTCCCGTATCCCCCTGCTCTAG

Translation (580 aa):
MKCVLVATEGAEVLFYWTDQEFEESLRLKFGQSENEEEELPALEDQLSTLLAPVIISSMTMLEKLSDTYT
CFSTENGNFLYVLHLAAAPRPGAACPAVGALPEPAVDLQPPAGAGAVLRRGGDYWARESSGLEAVSHSAS
SLRPADLLALILLVQDLYPSESTAEDDIQETDSFSLPEEYFTPAPSPGDQSSGSTIWLEGGTPPMDALQI
AEDTLQTLVPHCPVPSGPRRIFLDANVKESYCPLVPHTMYCLPLWQGINLVLLTRSPSAPLALVLSQLMD
GFSMLEKKLKEGPEPGASLRSQPLVGDLRQRMDKFVKNRGAQEIQSTWLEFKAKAFSKSEPGSSWELLQA
CGKLKRQLCAIYRLNFLTTAPSRGGPHLPQHLQDQVQRLMREKLTDWKDFLLVKSRRNITMVSYLEDFPG
LVHFIYVDRTTGQMVAPSLNCSQKTSSELGKGPLAAFVKTKVWSLIQLARRYLQKGYTTLLFQEGDFYCS
YFLWFENDMGYKLQMIEVPVLSDDSVPIGMLGGDYYRKLLRYYSKNRPTEAVRCYELLALHLSVIPTDLL
VQQAGQLARRLWEASRIPLL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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