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Genome Displays Related Resources Gene HomoloGene MANE RefSeq
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Report for CCDS4248.1 (current version)
CCDS |
Status |
Species |
Chrom. |
Gene |
CCDS Release |
NCBI Annotation Release |
Ensembl Annotation Release |
Links |
4248.1 |
Public |
Homo sapiens |
5 |
PCDHB6 |
24 |
110 |
108 |
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Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23
Review status: Reviewed (by RefSeq and Havana) Sequence IDs included in CCDS 4248.1
Original |
Current |
Source |
Nucleotide ID |
Protein ID |
MANE |
Status in CCDS |
Seq. Status |
Links |
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EBI |
ENST00000231136.4 |
ENSP00000231136.1 |
MANE Select |
Accepted |
alive |
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NCBI |
NM_018939.4 |
NP_061762.2 |
MANE Select |
Accepted |
alive |
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RefSeq |
Length |
Related UniProtKB/SwissProt |
Length |
Identity |
Gaps |
Mismatches |
NP_061762.2 |
794 |
Q9Y5E3 |
794 |
100% |
0 |
0 |
Chromosomal Locations for CCDS 4248.1
Assembly GRCh38.p14 (GCF_000001405.40)
CCDS Sequence Data |
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Blue highlighting indicates alternating exons. | Red highlighting indicates amino acids encoded across a splice junction. | | Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair. |
Nucleotide Sequence (2385 nt): ATGATGCAAACTAAAGTACAGAACAAGAAAAGGCAAGTGGCTTTCTTCATTTTATTGATGCTTTGGGGAG AGGTGGGTTCTGAATCGATTCAGTATTCCGTATTGGAGGAGACAGAAAGTGGCACGTTTGTGGCCAACTT GACAAAGGACCTGGGACTGAGGGTGGGGGAGCTGGCTTCGCGGGGCGCTCGGGTTGTTTTCAAAGGGAAC AGACAACATTTGCAGTTTGATCCACAGACCCATGATTTACTGCTAAATGAAAAACTGGACCGGGAGGAGC TGTGTGGCTCCACTGAGCCGTGTGTGCTACCTTTCCAAGTGTTACTGGAAAACCCCTTGCAGTTTTTTCA GGCTTCCTTGCGAGTCAGAGATATAAATGACCACGCCCCGGAATTCCCTGCCAGAGAAATGCTCCTGAAA ATATCAGAAATTACTATGCCAGGAAAGATATTTCCTTTGAAAATGGCACACGATTTAGACACCGGCAGCA ACGGCCTTCAGAGGTACACAATCAGCTCCAACCCTCACTTCCACGTTCTCACCCGCAATCGCAGCGAAGG CAGGAAGTTCCCGGAGCTGGTGCTAGACAAACCGTTGGACCGCGAGGAGCAGCCCCAACTCAGGCTAACG CTGATCGCGCTGGATGGCGGGTCTCCGCCCCGGTCAGGGACCTCCGAGATTCAGATCCAGGTTTTGGACA TCAATGACAACGTCCCCGAGTTTGCTCAGGAGCTCTATGAAGCACAAGTCCCTGAGAACAACCCCCTCGG CTCTCTGGTTATTACCGTCTCAGCCAGAGATTTAGATGCAGGATCGTTTGGGAAGGTATCTTACGCCCTG TTTCAAGTCGATGACGTCAACCAACCCTTCGAAATAAACGCAATCACAGGAGAAATTCGGCTGAGAAAGG CTTTGGATTTTGAGGAAATTCAGTCTTATGACGTGGATGTTGAGGCTACAGATGGTGGAGGCCTATCAGG AAAATGCTCTTTAGTCGTCAGGGTCCTGGACGTGAATGACAATGCCCCTGAACTCACCATGTCGTTCTTC ATCAGCCTCATCCCAGAAAACTTACCAGAGATCACAGTGGCAGTTTTCAGTGTTTCAGATGCAGACTCTG GACATAACCAACAGGTTATTTGTTCAATAGAGAACAATCTCCCCTTTCTACTAAGACCTTCCGTGGAGAA TTTCTACACCCTGGTAACAGAAGGCGCGCTGGACAGAGAGAGCAGAGCCGAGTACAACATCACTATCACG GTCACTGATTTGGGGACACCAAGGCTGAAAACCCAGCAGAGCATAACTGTGCAGGTCTCCGACGTCAATG ACAACGCCCCCGCCTTCACCCAAACCTCCTACACCCTGTTCGTCCGCGAGAACAACAGCCCCGCCCTGCA CATCGGCAGCGTCAGCGCCACAGACAGAGACTCAGGCATCAACGCCCAGGTCACCTACTCGCTGCTGCCG CCCCAGGACCCGCACCTGCCCCTCTCTTCCCTGGTCTCCATCAACGCGGACAACGGCCACCTGTTTGCCC TCAGGTCGCTGGACTACGAGGCCCTGCAGTCTTTCGAGTTCCGCGTGGGCGCCACAGACCGCGGCTCCCC GGCGTTGAGCAGCGAGGCGCTGGTGCGCTTGCTGGTGCTGGACGCCAACGACAACTCGCCCTTCGTGTTG TACCCGCTGCAGAACGGCTCCGCGCCCTGCACCGAGCTGGTGCCCCGGGCGGCCGAGCCGGGCTACCTGG TGACCAAGGTGGTGGCGGTGGACGGCGACTCGGGCCAGAACGCCTGGCTGTCGTACCAGCTGCTCAAGGC CACGGAGCTCGGTCTGTTCGGCGTGTGGGCGCACAATGGCGAGGTGCGCACCGCCAGGCTGCTGAGCGAG CGAGACGCAGCCAAGCACAGGCTGGTGGTGCTTGTCAAGGACAATGGCGAGCCTCCGCGCTCGGCCACCG CCACGCTGCACGTGCTCCTGGTGGACGGCTTCTCCCAGCCCTACCTGCCTCTCCCTGAGGCGGCCCCGGC CCAAGCCCAGGCCGACTCTCTCACCGTCTACCTGGTGGTGGCGTTGGCCTCGGTGTCGTCGCTCTTCCTC TTTTCGGTGCTCCTGTTCGTGGCGGTGCGGCTGTGCAGGAGGAGCAGGGCGGCCTCGGTGGGTCGCTACT CGGTGCCCGAGGGTCCCTTTCCAGGGCATCTGGTGGATGTGAGCGGCACCGGGACCCTATCCCAGAGCTA CCAGTACAAGGTGTGTCTGACGGGAGGCTCAGAAACAAATGAGTTCAAGTTCCTGAAGCCGATTATGCCC AACTTCCCTCCTCAGGGCACTGAGAGAGAAATGGAAGAAACCCCCACCTCTCGGAATAGCTTCCCGTTCA GTTAA
Translation (794 aa): MMQTKVQNKKRQVAFFILLMLWGEVGSESIQYSVLEETESGTFVANLTKDLGLRVGELASRGARVVFKGN RQHLQFDPQTHDLLLNEKLDREELCGSTEPCVLPFQVLLENPLQFFQASLRVRDINDHAPEFPAREMLLK ISEITMPGKIFPLKMAHDLDTGSNGLQRYTISSNPHFHVLTRNRSEGRKFPELVLDKPLDREEQPQLRLT LIALDGGSPPRSGTSEIQIQVLDINDNVPEFAQELYEAQVPENNPLGSLVITVSARDLDAGSFGKVSYAL FQVDDVNQPFEINAITGEIRLRKALDFEEIQSYDVDVEATDGGGLSGKCSLVVRVLDVNDNAPELTMSFF ISLIPENLPEITVAVFSVSDADSGHNQQVICSIENNLPFLLRPSVENFYTLVTEGALDRESRAEYNITIT VTDLGTPRLKTQQSITVQVSDVNDNAPAFTQTSYTLFVRENNSPALHIGSVSATDRDSGINAQVTYSLLP PQDPHLPLSSLVSINADNGHLFALRSLDYEALQSFEFRVGATDRGSPALSSEALVRLLVLDANDNSPFVL YPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNAWLSYQLLKATELGLFGVWAHNGEVRTARLLSE RDAAKHRLVVLVKDNGEPPRSATATLHVLLVDGFSQPYLPLPEAAPAQAQADSLTVYLVVALASVSSLFL FSVLLFVAVRLCRRSRAASVGRYSVPEGPFPGHLVDVSGTGTLSQSYQYKVCLTGGSETNEFKFLKPIMP NFPPQGTEREMEETPTSRNSFPFS
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