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Report for CCDS1748.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
1748.1 Public Homo sapiens 2 MPV17 24 110 108 CCDS HistoryNCBI Gene:4358Re-query CCDS DB by CCDS ID:1748.1Re-query CCDS DB by GeneID:4358See the combined annotation on chromosome 2 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 1748.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000233545.6 ENSP00000233545.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000233545.6Link to Ensembl Protein Viewer:ENSP00000233545.2Re-query CCDS DB by Nucleotide ID:ENST00000233545Re-query CCDS DB by Protein ID:ENSP00000233545
Original member Current member EBI ENST00000380044.6 ENSP00000369383.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000380044.6Link to Ensembl Protein Viewer:ENSP00000369383.1Re-query CCDS DB by Nucleotide ID:ENST00000380044Re-query CCDS DB by Protein ID:ENSP00000369383
Original member Current member NCBI NM_002437.5 NP_002428.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_002437.5Link to Protein Sequence:NP_002428.1Re-query CCDS DB by Nucleotide ID:NM_002437Re-query CCDS DB by Protein ID:NP_002428Link to BLAST:NP_002428.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_002428.1 176 P39210 176 100% 0 0

Chromosomal Locations for CCDS 1748.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 2 (NC_000002.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2See the combined annotation on chromosome 2 in Sequence Viewer

Chromosome Start Stop Links
2 27309912 27309981 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 27311899 27311951 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 27312214 27312246 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 27312494 27312589 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 27312680 27312772 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 27312994 27313109 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 27322448 27322517 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (531 nt):
ATGGCACTCTGGCGGGCATACCAGCGGGCCCTGGCCGCTCACCCGTGGAAAGTACAGGTCCTGACAGCTG
GGTCCCTGATGGGCCTGGGTGACATTATCTCACAGCAGCTGGTGGAGAGGCGGGGTCTGCAGGAACACCA
GAGAGGCCGGACTCTGACCATGGTGTCCCTGGGCTGTGGCTTTGTGGGCCCTGTGGTAGGAGGCTGGTAC
AAGGTTTTGGATCGGTTCATCCCTGGCACCACCAAAGTGGATGCACTGAAGAAGATGTTGTTGGATCAGG
GGGGCTTTGCCCCGTGTTTTCTAGGCTGCTTTCTCCCACTGGTAGGGGCACTTAATGGACTGTCAGCCCA
GGACAACTGGGCCAAACTACAGCGGGATTATCCTGATGCCCTTATCACCAACTACTATCTATGGCCTGCT
GTGCAGTTAGCCAACTTCTACCTGGTCCCCCTTCATTACAGGTTGGCCGTTGTCCAATGTGTTGCTGTTA
TCTGGAACTCCTACCTGTCCTGGAAGGCACATCGGCTCTAA

Translation (176 aa):
MALWRAYQRALAAHPWKVQVLTAGSLMGLGDIISQQLVERRGLQEHQRGRTLTMVSLGCGFVGPVVGGWY
KVLDRFIPGTTKVDALKKMLLDQGGFAPCFLGCFLPLVGALNGLSAQDNWAKLQRDYPDALITNYYLWPA
VQLANFYLVPLHYRLAVVQCVAVIWNSYLSWKAHRL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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