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Report for CCDS47383.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
47383.1 Public Homo sapiens 6 RIPOR2 24 110 108 CCDS HistoryNCBI Gene:9750Re-query CCDS DB by CCDS ID:47383.1Re-query CCDS DB by GeneID:9750See the combined annotation on chromosome 6 in Sequence Viewer

Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 47383.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000259698.9 ENSP00000259698.4 Accepted alive Link to Ensembl Transcript Viewer:ENST00000259698.9Link to Ensembl Protein Viewer:ENSP00000259698.4Re-query CCDS DB by Nucleotide ID:ENST00000259698Re-query CCDS DB by Protein ID:ENSP00000259698
Original member Current member EBI ENST00000613507.4 ENSP00000482957.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000613507.4Link to Ensembl Protein Viewer:ENSP00000482957.1Re-query CCDS DB by Nucleotide ID:ENST00000613507Re-query CCDS DB by Protein ID:ENSP00000482957
Original member Current member NCBI NM_014722.5 NP_055537.2 Accepted alive Link to Nucleotide Sequence:NM_014722.5Link to Protein Sequence:NP_055537.2Re-query CCDS DB by Nucleotide ID:NM_014722Re-query CCDS DB by Protein ID:NP_055537Link to BLAST:NP_055537.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_055537.2 1068 Q9Y4F9-1 1068 100% 0 0

Chromosomal Locations for CCDS 47383.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 6 (NC_000006.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6See the combined annotation on chromosome 6 in Sequence Viewer

Chromosome Start Stop Links
6 24806373 24806473 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 24809717 24809807 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 24818542 24818625 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 24825226 24825428 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 24828137 24828295 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 24830509 24830670 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 24832256 24832391 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 24835703 24835871 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 24839091 24839272 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 24842862 24843554 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 24847542 24847691 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 24848025 24848154 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 24849802 24849950 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 24850597 24850722 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 24852575 24852618 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 24860973 24861036 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 24865301 24865450 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 24869094 24869147 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 24870866 24870889 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 24872881 24872959 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 24873644 24873799 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 24875691 24875791 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (3207 nt):
ATGTTGGTAGGATCCCAGTCTTTTTCGCCTGGAGGGCCCAATGGGATCATTAGAAGCCAGTCCTTTGCGG
GTTTCAGCGGCCTCCAGGAAAGGCGATCCAGGTGTAACTCCTTCATTGAAAATTCCTCCGCTCTCAAGAA
GCCTCAGGCCAAACTGAAGAAAATGCACAATTTAGGCCACAAAAACAACAATCCCCCCAAAGAGCCTCAG
CCTAAAAGGGTGGAAGAAGTCTACAGGGCCTTGAAAAATGGACTTGATGAATATCTGGAGGTTCACCAGA
CGGAGCTGGACAAGTTGACAGCTCAGTTAAAAGATATGAAAAGAAACTCTCGCCTGGGTGTACTGTATGA
CCTAGACAAGCAAATTAAAACAATTGAAAGATACATGAGACGCCTGGAGTTTCATATAAGTAAGGTAGAT
GAACTCTATGAAGCTTATTGTATCCAGCGACGCCTCCAGGATGGTGCCAGCAAAATGAAGCAAGCCTTCG
CAACATCCCCTGCCAGCAAAGCTGCCCGGGAGAGTCTGACAGAGATCAATCGGAGCTTCAAGGAGTACAC
AGAGAATATGTGCACCATTGAAGTGGAGCTAGAGAATCTGCTGGGAGAATTCTCCATCAAGATGAAAGGT
CTGGCTGGCTTTGCACGCCTCTGTCCTGGAGATCAATATGAAATTTTCATGAAGTATGGCCGGCAGCGGT
GGAAACTGAAAGGCAAAATAGAAGTAAATGGCAAGCAGAGCTGGGATGGAGAAGAAACAGTTTTTCTGCC
CCTGATAGTTGGGTTCATCTCCATCAAGGTCACGGAGCTCAAAGGGCTAGCAACTCACATCCTGGTAGGT
AGCGTGACCTGTGAGACCAAAGAGCTGTTTGCAGCCCGACCTCAGGTAGTGGCTGTCGACATCAATGACC
TTGGTACCATCAAACTGAACCTGGAAATCACCTGGTATCCATTTGACGTGGAGGACATGACCGCATCCTC
AGGCGCTGGGAACAAGGCAGCAGCCCTTCAGAGGAGAATGTCCATGTACAGCCAGGGTACCCCGGAAACG
CCCACCTTCAAAGACCACTCCTTCTTTAGGTGGCTGCATCCTTCCCCAGACAAGCCCAGGCGGCTGTCTG
TCTTGAGTGCCTTGCAAGACACTTTCTTTGCCAAGCTGCACCGCAGCCGCTCCTTCAGTGACCTGCCCTC
CCTCAGGCCGAGTCCCAAGGCCGTGCTAGAGCTCTATTCAAATCTACCTGATGACATCTTTGAAAATGGA
AAGGCAGCCGAGGAGAAAATGCCACTGTCGCTCAGCTTCAGTGACCTGCCCAACGGGGACTGCGCCCTCA
CCTCCCACTCAACAGGCTCCCCTTCCAACTCAACAAATCCAGAAATTACCATCACCCCTGCGGAGTTTAA
CCTCAGCAGCTTGGCCTCCCAGAATGAGGGTATGGATGACACCAGCTCAGCATCTTCCAGGAACTCCCTG
GGAGAAGGCCAAGAGCCAAAGTCACACCTGAAGGAGGAAGACCCAGAGGAGCCCAGAAAACCTGCCTCGG
CCCCATCTGAGGCTTGCCGCCGACAGTCCTCAGGTGCTGGGGCTGAGCACCTGTTCCTTGAGAATGATGT
TGCAGAAGCACTTCTGCAAGAGTCTGAGGAGGCCTCTGAGCTCAAGCCTGTGGAACTGGACACTTCGGAA
GGAAACATCACAAAGCAGCTGGTCAAGAGGCTCACATCTGCAGAGGTGCCAATGGCCACAGACAGGCTGC
TCTCTGAGGGTTCTGTTGGTGGAGAATCTGAAGGCTGCAGATCCTTTCTAGATGGAAGCTTAGAGGATGC
TTTTAATGGGCTTTTACTTGCATTAGAACCACATAAAGAGCAGTATAAAGAGTTTCAGGATCTGAACCAA
GAAGTCATGAATTTGGATGATATTCTAAAATGCAAGCCAGCAGTAAGCCGCAGCAGGTCTTCCAGTTTAA
GTCTCACAGTTGAAAGTGCTTTAGAAAGCTTTGATTTCCTGAACACCTCTGATTTTGACGAGGAGGAGGA
TGGTGATGAGGTTTGTAATGTTGGCGGAGGTGCTGACTCAGTATTTTCAGACACTGAGACTGAGAAACAC
AGTTACAGGTCGGTTCACCCAGAAGCCAGGGGGCATCTCAGTGAAGCGCTCACTGAAGACACAGGAGTTG
GGACCAGTGTGGCAGGAAGTCCTCTCCCACTGACCACAGGCAACGAGAGCCTGGACATCACCATCGTCAG
GCACCTCCAGTACTGCACCCAACTCGTGCAGCAAATTGTTTTCTCAAGCAAAACCCCATTTGTGGCAAGA
AGTCTCTTAGAGAAGCTTTCTAGGCAGATCCAAGTGATGGAGAAACTCGCAGCTGTCAGTGATGAGAACA
TAGGAAATATCAGTTCTGTTGTGGAAGCCATACCAGAATTTCACAAAAAGCTGTCTTTGCTGTCATTCTG
GACCAAGTGCTGCAGCCCTGTTGGTGTCTACCACAGCCCAGCGGACAGAGTGATGAAGCAGCTGGAGGCC
AGCTTTGCCAGAACTGTCAACAAAGAATATCCAGGACTTGCAGACCCAGTGTTTCGAACCCTGGTGTCCC
AAATTCTGGACCGGGCTGAGCCTCTGCTTTCCTCCAGCCTGTCCTCGGAAGTCGTCACTGTTTTCCAGTA
TTACAGTTACTTCACCAGCCACGGCGTCAGTGACCTGGAGAGTTACCTGAGCCAGCTGGCCAGGCAAGTT
TCCATGGTTCAGACTCTGCAATCACTAAGAGATGAAAAACTGCTACAAACCATGAGTGACCTTGCTCCCA
GCAACCTCCTGGCCCAGCAGGAAGTACTCAGGACTCTGGCTCTGCTATTAACCAGAGAGGACAACGAAGT
TAGTGAGGCTGTGACGCTTTACTTGGCAGCAGCCTCCAAAAATCAGCATTTCAGGGAAAAGGCCTTGCTC
TATTACTGTGAAGCACTAACAAAGACAAACCTCCAGCTCCAGAAAGCAGCTTGCCTGGCTCTGAAAATCC
TTGAGGCTACTGAAAGCATTAAAATGCTGGTGACATTGTGTCAATCTGATACTGAAGAAATCAGAAATGT
GGCCTCAGAAACCCTCTTGTCTCTGGGAGAAGATGGGCGGCTGGCATATGAACAATTGGACAAATTTCCT
CGAGACTGTGTTAAAGTCGGAGGTCGTCATGGAACTGAAGTTGCCACAGCCTTTTAA

Translation (1068 aa):
MLVGSQSFSPGGPNGIIRSQSFAGFSGLQERRSRCNSFIENSSALKKPQAKLKKMHNLGHKNNNPPKEPQ
PKRVEEVYRALKNGLDEYLEVHQTELDKLTAQLKDMKRNSRLGVLYDLDKQIKTIERYMRRLEFHISKVD
ELYEAYCIQRRLQDGASKMKQAFATSPASKAARESLTEINRSFKEYTENMCTIEVELENLLGEFSIKMKG
LAGFARLCPGDQYEIFMKYGRQRWKLKGKIEVNGKQSWDGEETVFLPLIVGFISIKVTELKGLATHILVG
SVTCETKELFAARPQVVAVDINDLGTIKLNLEITWYPFDVEDMTASSGAGNKAAALQRRMSMYSQGTPET
PTFKDHSFFRWLHPSPDKPRRLSVLSALQDTFFAKLHRSRSFSDLPSLRPSPKAVLELYSNLPDDIFENG
KAAEEKMPLSLSFSDLPNGDCALTSHSTGSPSNSTNPEITITPAEFNLSSLASQNEGMDDTSSASSRNSL
GEGQEPKSHLKEEDPEEPRKPASAPSEACRRQSSGAGAEHLFLENDVAEALLQESEEASELKPVELDTSE
GNITKQLVKRLTSAEVPMATDRLLSEGSVGGESEGCRSFLDGSLEDAFNGLLLALEPHKEQYKEFQDLNQ
EVMNLDDILKCKPAVSRSRSSSLSLTVESALESFDFLNTSDFDEEEDGDEVCNVGGGADSVFSDTETEKH
SYRSVHPEARGHLSEALTEDTGVGTSVAGSPLPLTTGNESLDITIVRHLQYCTQLVQQIVFSSKTPFVAR
SLLEKLSRQIQVMEKLAAVSDENIGNISSVVEAIPEFHKKLSLLSFWTKCCSPVGVYHSPADRVMKQLEA
SFARTVNKEYPGLADPVFRTLVSQILDRAEPLLSSSLSSEVVTVFQYYSYFTSHGVSDLESYLSQLARQV
SMVQTLQSLRDEKLLQTMSDLAPSNLLAQQEVLRTLALLLTREDNEVSEAVTLYLAAASKNQHFREKALL
YYCEALTKTNLQLQKAACLALKILEATESIKMLVTLCQSDTEEIRNVASETLLSLGEDGRLAYEQLDKFP
RDCVKVGGRHGTEVATAF


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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