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Report for CCDS1033.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
1033.1 Public Homo sapiens 1 SPRR3 24 110 108 CCDS HistoryNCBI Gene:6707Re-query CCDS DB by CCDS ID:1033.1Re-query CCDS DB by GeneID:6707See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 1033.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000295367.5 ENSP00000295367.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000295367.5Link to Ensembl Protein Viewer:ENSP00000295367.4Re-query CCDS DB by Nucleotide ID:ENST00000295367Re-query CCDS DB by Protein ID:ENSP00000295367
Original member Current member EBI ENST00000331860.7 ENSP00000330391.3 Accepted alive Link to Ensembl Transcript Viewer:ENST00000331860.7Link to Ensembl Protein Viewer:ENSP00000330391.3Re-query CCDS DB by Nucleotide ID:ENST00000331860Re-query CCDS DB by Protein ID:ENSP00000330391
Original member Current member NCBI NM_001097589.2 NP_001091058.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001097589.2Link to Protein Sequence:NP_001091058.1Re-query CCDS DB by Nucleotide ID:NM_001097589Re-query CCDS DB by Protein ID:NP_001091058Link to BLAST:NP_001091058.1
Original member Current member NCBI NM_005416.3 NP_005407.1 Accepted alive Link to Nucleotide Sequence:NM_005416.3Link to Protein Sequence:NP_005407.1Re-query CCDS DB by Nucleotide ID:NM_005416Re-query CCDS DB by Protein ID:NP_005407Link to BLAST:NP_005407.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001091058.1 169 Q9UBC9 169 100% 0 0
NP_005407.1 169 Q9UBC9 169 100% 0 0

Chromosomal Locations for CCDS 1033.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 1 (NC_000001.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 153003021 153003530 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (510 nt):
ATGAGTTCTTACCAGCAGAAGCAGACCTTTACCCCACCACCTCAGCTTCAACAGCAGCAGGTGAAACAAC
CCAGCCAGCCTCCACCTCAGGAAATATTTGTTCCCACAACCAAGGAGCCATGCCACTCAAAGGTTCCACA
ACCTGGAAACACAAAGATTCCAGAGCCAGGCTGTACCAAGGTCCCTGAGCCAGGCTGTACCAAGGTCCCT
GAGCCAGGCTGTACCAAGGTCCCTGAGCCAGGTTGTACCAAGGTCCCTGAGCCAGGCTGTACCAAGGTCC
CTGAGCCAGGTTGTACCAAGGTCCCTGAGCCAGGCTACACCAAGGTCCCTGAACCAGGCAGCATCAAGGT
CCCTGACCAAGGCTTCATCAAGTTTCCTGAGCCAGGTGCCATCAAAGTTCCTGAGCAAGGATACACCAAA
GTTCCTGTGCCAGGCTACACAAAGCTACCAGAGCCATGTCCTTCAACGGTCACTCCAGGCCCAGCTCAGC
AGAAGACCAAGCAGAAGTAA

Translation (169 aa):
MSSYQQKQTFTPPPQLQQQQVKQPSQPPPQEIFVPTTKEPCHSKVPQPGNTKIPEPGCTKVPEPGCTKVP
EPGCTKVPEPGCTKVPEPGCTKVPEPGCTKVPEPGYTKVPEPGSIKVPDQGFIKFPEPGAIKVPEQGYTK
VPVPGYTKLPEPCPSTVTPGPAQQKTKQK


Links Key
 Links to:   History report
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  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
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