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Report for CCDS10584.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
10584.1 Public Homo sapiens 16 PDILT 24 110 108 CCDS HistoryNCBI Gene:204474Re-query CCDS DB by CCDS ID:10584.1Re-query CCDS DB by GeneID:204474See the combined annotation on chromosome 16 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 10584.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000302451.9 ENSP00000305465.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000302451.9Link to Ensembl Protein Viewer:ENSP00000305465.4Re-query CCDS DB by Nucleotide ID:ENST00000302451Re-query CCDS DB by Protein ID:ENSP00000305465
Original member Current member NCBI NM_174924.2 NP_777584.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_174924.2Link to Protein Sequence:NP_777584.1Re-query CCDS DB by Nucleotide ID:NM_174924Re-query CCDS DB by Protein ID:NP_777584Link to BLAST:NP_777584.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_777584.1 584 Q8N807 584 100% 0 0

Chromosomal Locations for CCDS 10584.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 16 (NC_000016.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16See the combined annotation on chromosome 16 in Sequence Viewer

Chromosome Start Stop Links
16 20359319 20359567 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 20360568 20360657 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 20362404 20362582 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 20365420 20365540 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 20369492 20369689 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 20372802 20372927 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 20373012 20373122 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 20374822 20374959 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 20376068 20376201 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 20384645 20384851 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 20399099 20399300 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1755 nt):
ATGGACCTACTCTGGATGCCCCTGCTGCTGGTGGCCGCTTGTGTCTCTGCTGTCCACAGCTCACCAGAGG
TTAACGCCGGTGTTTCCAGCATCCACATAACCAAGCCTGTGCACATCCTGGAGGAACGCAGTCTCCTAGT
GCTAACGCCCGCTGGCCTGACCCAGATGCTGAACCAGACCCGCTTCCTCATGGTGCTTTTCCACAACCCA
TCCTCAAAGCAATCCAGGAACTTGGCGGAAGAGCTGGGCAAAGCTGTGGAGATCATGGGCAAAGGCAAGA
ATGGGATCGGCTTTGGCAAAGTGGACATTACCATAGAGAAGGAGCTTCAGCAGGAGTTTGGGATTACCAA
GGCCCCGGAGTTGAAGCTGTTTTTTGAGGGCAACAGGTCAGAGCCCATCAGCTGCAAAGGAGTGGTTGAA
TCTGCTGCCTTAGTCGTTTGGTTGAGACGACAAATTAGCCAGAAAGCATTTTTGTTCAACAGCAGCGAGC
AGGTGGCAGAGTTTGTGATATCCAGGCCCTTGGTCATCGTTGGCTTCTTCCAGGATTTAGAGGAAGAAGT
AGCAGAGTTGTTCTATGATGTGATCAAAGACTTTCCAGAGCTAACGTTTGGAGTCATAACGATTGGCAAT
GTCATTGGGCGTTTCCACGTCACCCTTGACAGCGTCCTGGTGTTCAAAAAGGGAAAAATTGTGAACCGCC
AAAAGCTTATTAATGACAGTACCAACAAACAGGAACTCAATCGTGTCATAAAACAGCACCTTACAGATTT
TGTGATCGAATACAACACTGAGAATAAGGATCTGATTTCCGAGTTGCACATCATGAGTCACATGCTGCTG
TTTGTCTCCAAAAGCTCCGAGTCATATGGTATCATAATTCAGCATTATAAGCTGGCATCAAAGGAATTCC
AAAACAAGATCCTTTTCATCCTTGTGGATGCAGACGAACCCAGAAATGGACGTGTCTTCAAGTACTTCCG
GGTCACAGAGGTCGATATCCCATCCGTCCAAATCCTAAACTTGAGCTCTGACGCCAGGTACAAAATGCCT
TCAGATGACATAACCTACGAAAGCCTCAAGAAATTTGGCCGCAGCTTCCTGAGTAAAAATGCCACAAAAC
ATCAATCCAGTGAAGAGATTCCAAAATACTGGGACCAGGGACTGGTTAAGCAGCTCGTGGGGAAGAACTT
CAACGTAGTCGTCTTTGACAAAGAAAAGGACGTATTTGTGATGTTCTATGCACCCTGGTCTAAAAAGTGC
AAGATGCTGTTCCCACTGTTGGAGGAATTGGGCAGAAAATATCAAAACCACTCCACAATTATCATTGCCA
AGATCGATGTCACAGCAAATGACATTCAGCTGATGTACCTGGACCGGTACCCATTCTTCAGGCTGTTCCC
CAGCGGCTCTCAACAAGCTGTCCTGTATAAGGGAGAACACACCCTGAAGGGCTTCTCTGACTTCCTGGAA
AGCCACATCAAAACTAAGATTGAGGATGAGGATGAGCTGTTGTCTGTTGAGCAAAATGAAGTGATAGAAG
AGGAAGTGCTAGCTGAGGAAAAGGAGGTGCCTATGATGAGGAAAGGGTTACCTGAACAGCAGTCGCCTGA
GCTGGAGAACATGACCAAGTACGTATCCAAGCTGGAAGAGCCCGCTGGGAAGAAGAAAACATCTGAGGAG
GTGGTGGTGGTGGTGGCTAAGCCAAAGGGACCTCCAGTGCAAAAGAAGAAACCAAAAGTCAAGGAAGAAC
TTTAG

Translation (584 aa):
MDLLWMPLLLVAACVSAVHSSPEVNAGVSSIHITKPVHILEERSLLVLTPAGLTQMLNQTRFLMVLFHNP
SSKQSRNLAEELGKAVEIMGKGKNGIGFGKVDITIEKELQQEFGITKAPELKLFFEGNRSEPISCKGVVE
SAALVVWLRRQISQKAFLFNSSEQVAEFVISRPLVIVGFFQDLEEEVAELFYDVIKDFPELTFGVITIGN
VIGRFHVTLDSVLVFKKGKIVNRQKLINDSTNKQELNRVIKQHLTDFVIEYNTENKDLISELHIMSHMLL
FVSKSSESYGIIIQHYKLASKEFQNKILFILVDADEPRNGRVFKYFRVTEVDIPSVQILNLSSDARYKMP
SDDITYESLKKFGRSFLSKNATKHQSSEEIPKYWDQGLVKQLVGKNFNVVVFDKEKDVFVMFYAPWSKKC
KMLFPLLEELGRKYQNHSTIIIAKIDVTANDIQLMYLDRYPFFRLFPSGSQQAVLYKGEHTLKGFSDFLE
SHIKTKIEDEDELLSVEQNEVIEEEVLAEEKEVPMMRKGLPEQQSPELENMTKYVSKLEEPAGKKKTSEE
VVVVVAKPKGPPVQKKKPKVKEEL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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