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Report for CCDS8419.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
8419.1 Public Homo sapiens 11 RNF26 24 110 108 CCDS HistoryNCBI Gene:79102Re-query CCDS DB by CCDS ID:8419.1Re-query CCDS DB by GeneID:79102See the combined annotation on chromosome 11 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 8419.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000311413.5 ENSP00000312439.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000311413.5Link to Ensembl Protein Viewer:ENSP00000312439.4Re-query CCDS DB by Nucleotide ID:ENST00000311413Re-query CCDS DB by Protein ID:ENSP00000312439
Original member Current member NCBI NM_032015.5 NP_114404.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_032015.5Link to Protein Sequence:NP_114404.1Re-query CCDS DB by Nucleotide ID:NM_032015Re-query CCDS DB by Protein ID:NP_114404Link to BLAST:NP_114404.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_114404.1 433 Q9BY78 433 100% 0 0

Chromosomal Locations for CCDS 8419.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 11 (NC_000011.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11See the combined annotation on chromosome 11 in Sequence Viewer

Chromosome Start Stop Links
11 119335123 119336424 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1302 nt):
ATGGAGGCAGTGTACCTGGTAGTGAATGGGTTGGGCCTGGTGCTGGACGTGCTGACCTTGGTGTTGGACC
TCAACTTCCTGCTGGTGTCCTCCCTCCTGGCTTCCCTGGCCTGGCTCCTGGCCTTCGTCTACAACCTGCC
GCACACGGTACTGACTAGTCTTCTGCACTTGGGCCGCGGAGTCTTGCTTTCATTGCTGGCCTTGATCGAA
GCCGTGGTCCGGTTCACATGTGGGGGCTTGCAGGCCTTGTGTACTCTGCTGTATAGCTGCTGCTCTGGCC
TAGAGAGCCTAAAGCTCCTGGGGCACCTGGCCTCTCATGGGGCACTGCGGAGCAGGGAGATACTGCACCG
GGGCGTCCTCAATGTGGTCTCCAGTGGCCATGCTTTGCTGCGCCAGGCCTGTGACATCTGTGCCATTGCC
ATGAGCCTGGTGGCTTATGTGATCAACAGCCTGGTCAACATCTGCCTCATCGGCACTCAGAACCTCTTTT
CCCTGGTGCTGGCCCTGTGGGATGCAGTGACCGGGCCTCTGTGGAGGATGACGGACGTAGTGGCTGCCTT
CCTAGCCCACATTTCCAGCAGTGCTGTGGCCATGGCCATCCTCCTTTGGACACCCTGCCAACTAGCCCTG
GAGCTGCTGGCCTCAGCTGCCCGCCTCCTGGCCAGCTTTGTGCTTGTCAATCTCACTGGCTTGGTGTTGC
TAGCTTGTGTGCTGGCAGTGACGGTGACTGTGTTGCATCCGGACTTCACCCTGAGGCTGGCTACCCAGGC
ACTCAGCCAGCTCCATGCCCGGCCATCCTACCACCGTCTTCGAGAGGATGTCATGCGGCTCTCTCGCCTA
GCACTGGGCTCAGAGGCCTGGCGCCGAGTCTGGAGCCGCAGTCTGCAGCTGGCGAGTTGGCCAAACCGGG
GAGGGGCACCTGGAGCTCCCCAGGGTGACCCTATGAGGGTATTCTCAGTTAGGACCCGGAGACAGGACAC
TCTTCCTGAAGCGGGGCGCAGATCAGAGGCAGAAGAGGAGGAGGCCAGGACCATCAGAGTGACACCTGTC
AGGGGCCGAGAGAGGCTCAATGAGGAGGAGCCTCCAGGTGGGCAAGACCCTTGGAAATTGCTGAAGGAGC
AAGAGGAGCGGAAGAAGTGTGTCATCTGCCAGGACCAGAGCAAGACAGTGTTGCTCCTGCCCTGCCGGCA
TCTGTGCCTGTGCCAGGCCTGCACTGAAATCCTGATGCGCCACCCCGTCTACCACCGCAATTGCCCGCTC
TGCCGCCGGGGCATCCTGCAGACCCTCAATGTCTACCTCTGA

Translation (433 aa):
MEAVYLVVNGLGLVLDVLTLVLDLNFLLVSSLLASLAWLLAFVYNLPHTVLTSLLHLGRGVLLSLLALIE
AVVRFTCGGLQALCTLLYSCCSGLESLKLLGHLASHGALRSREILHRGVLNVVSSGHALLRQACDICAIA
MSLVAYVINSLVNICLIGTQNLFSLVLALWDAVTGPLWRMTDVVAAFLAHISSSAVAMAILLWTPCQLAL
ELLASAARLLASFVLVNLTGLVLLACVLAVTVTVLHPDFTLRLATQALSQLHARPSYHRLREDVMRLSRL
ALGSEAWRRVWSRSLQLASWPNRGGAPGAPQGDPMRVFSVRTRRQDTLPEAGRRSEAEEEEARTIRVTPV
RGRERLNEEEPPGGQDPWKLLKEQEERKKCVICQDQSKTVLLLPCRHLCLCQACTEILMRHPVYHRNCPL
CRRGILQTLNVYL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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