NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq


Report for CCDS32977.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
32977.1 Public Homo sapiens 19 ZNF85 24 110 108 CCDS HistoryNCBI Gene:7639Re-query CCDS DB by CCDS ID:32977.1Re-query CCDS DB by GeneID:7639See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 32977.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000328178.13 ENSP00000329793.7 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000328178.13Link to Ensembl Protein Viewer:ENSP00000329793.7Re-query CCDS DB by Nucleotide ID:ENST00000328178Re-query CCDS DB by Protein ID:ENSP00000329793
Original member Current member NCBI NM_003429.5 NP_003420.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_003429.5Link to Protein Sequence:NP_003420.2Re-query CCDS DB by Nucleotide ID:NM_003429Re-query CCDS DB by Protein ID:NP_003420Link to BLAST:NP_003420.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_003420.2 595 Q03923-1 595 100% 0 0

Chromosomal Locations for CCDS 32977.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 19 (NC_000019.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 20923401 20923403 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 20934024 20934150 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 20934949 20935047 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 20948744 20950302 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1788 nt):
ATGGGACCATTGACATTTAGGGATGTGGCCATAGAATTCTCTCTGAAGGAGTGGCAATGCCTGGACACTG
CACAGCGGAATTTATATAGAAATGTGATGTTAGAGAACTACAGAAACCTGGTCTTCCTGGGTATTACTGT
TTCTAAGCCAGACCTGATCACTTGTCTGGAGCAAGGGAAAGAGGCCTGGAGTATGAAGAGACATGAGATC
ATGGTGGCCAAACCCACAGTTATGTGTTCTCATTTTGCCCAAGACCTTTGGCCGGAGCAGAATATAAAAG
ATTCTTTCCAAAAAGTGACACTGAAAAGATATGGAAAATGTAGACATGAAAATTTACCATTAAGAAAAGG
CTGTGAAAGTATGGATGAGTGTAAGATGCACAAAGGAGGTTGTAATGGACTTAACCAATGTCTCACAGCT
ACCCAGAGCAAAATATTTCAATGTGATAAATATGTAAAAGTCGCTCATAAATTTTCAAATTCAAACAGAC
ATGAGATAAGACATACTAAAAAGAAACCTTTCAAATGTACAAAATGTGGCAAATCATTTGGCATGATTTC
ATGCCTAACTGAACATAGCAGAATTCATACTAGAGTAAATTTCTACAAATGTGAAGAATGTGGAAAAGCC
TTTAACTGGTCCTCAACCCTTACTAAACATAAGAGAATTCATACGGGAGAGAAACCTTACAAATGTGAAG
AATGTGGTAAAGCCTTTAACCAGTCCTCAAACCTTATTAAACATAAGAAAATTCATACTGGAGAGAAACC
CTACAAATGTGAAGAATGTGGCAAAACTTTTAACCGATTCTCAACTCTTACTACCCATAAGATAATTCAT
ACTGGAGAGAAACCCTACAAATGTAAAGAATGTGGTAAAGCTTTTAACCGATCTTCAACCCTTACTACCC
ATAGAAAAATTCATACTGGAGAGAAACCTTACAAATGTGAAGAATGTGGCAAAGCCTTTAAGCAGTCCTC
AAACCTTACTACACATAAGATAATTCATACTGGAGAGAAACCCTACAAATGTAAAAAATGTGGAAAAGCC
TTTAACCAGTCTGCACACCTTACCACACATGAGGTAATTCATACTGGAGAGAAACCCTACAAATGTGAAA
AATGTGGAAAAGCCTTTAATCATTTCTCACACCTTACTACACATAAGATAATTCATACTGGAGAGAAACC
TTACAAATGTAAAGAATGTGGTAAAGCTTTTAAACACTCTTCAACCCTTACTAAACATAAGATAATTCAT
ACTGGAGAGAAGCCTTACAAATGTAAAGAATGTGAAAAAGCTTTTAACCAATCCTCAAAACTTACTGAAC
ATAAGAAAATTCATACTGGAGAGAAACCCTATGAATGTGAAAAATGTGGCAAAGCTTTTAACCAGTCCTC
AAATCTTACTAGACATAAGAAAAGTCATACAGAAGAGAAACCTTACAAATGTGAAGAATGTGGCAAAGGT
TTTAAATGGCCCTCAACCCTTACTATCCATAAGATAATTCATACTGGAGAGAAACCATACAAATGTGAAG
AATGTGGCAAAGCTTTTAACCAATCCTCAAAACTTACCAAACATAAGAAAATTCATACTGGAGAGAAACC
CTACACATGTGAAGAATGTGGCAAAGCCTTTAACCAGTCCTCAAACCTTACTAAACATAAGAGAATTCAT
ACTGGAGAAAAACCTTACAAATGTGAAGAATGTGACAAAGCTTTTAAATGGTCCTCAGTCCTTACTAAAC
ATAAGATAATTCATACCGGAGAAAAATTACAAATATGA

Translation (595 aa):
MGPLTFRDVAIEFSLKEWQCLDTAQRNLYRNVMLENYRNLVFLGITVSKPDLITCLEQGKEAWSMKRHEI
MVAKPTVMCSHFAQDLWPEQNIKDSFQKVTLKRYGKCRHENLPLRKGCESMDECKMHKGGCNGLNQCLTA
TQSKIFQCDKYVKVAHKFSNSNRHEIRHTKKKPFKCTKCGKSFGMISCLTEHSRIHTRVNFYKCEECGKA
FNWSSTLTKHKRIHTGEKPYKCEECGKAFNQSSNLIKHKKIHTGEKPYKCEECGKTFNRFSTLTTHKIIH
TGEKPYKCKECGKAFNRSSTLTTHRKIHTGEKPYKCEECGKAFKQSSNLTTHKIIHTGEKPYKCKKCGKA
FNQSAHLTTHEVIHTGEKPYKCEKCGKAFNHFSHLTTHKIIHTGEKPYKCKECGKAFKHSSTLTKHKIIH
TGEKPYKCKECEKAFNQSSKLTEHKKIHTGEKPYECEKCGKAFNQSSNLTRHKKSHTEEKPYKCEECGKG
FKWPSTLTIHKIIHTGEKPYKCEECGKAFNQSSKLTKHKKIHTGEKPYTCEECGKAFNQSSNLTKHKRIH
TGEKPYKCEECDKAFKWSSVLTKHKIIHTGEKLQI


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH