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Report for CCDS33257.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
33257.1 Public Homo sapiens 2 COA5 24 110 108 CCDS HistoryNCBI Gene:493753Re-query CCDS DB by CCDS ID:33257.1Re-query CCDS DB by GeneID:493753See the combined annotation on chromosome 2 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 33257.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000328709.8 ENSP00000330730.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000328709.8Link to Ensembl Protein Viewer:ENSP00000330730.3Re-query CCDS DB by Nucleotide ID:ENST00000328709Re-query CCDS DB by Protein ID:ENSP00000330730
Original member Current member NCBI NM_001008215.3 NP_001008216.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001008215.3Link to Protein Sequence:NP_001008216.1Re-query CCDS DB by Nucleotide ID:NM_001008215Re-query CCDS DB by Protein ID:NP_001008216Link to BLAST:NP_001008216.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001008216.1 74 Q86WW8 74 100% 0 0

Chromosomal Locations for CCDS 33257.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 2 (NC_000002.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2See the combined annotation on chromosome 2 in Sequence Viewer

Chromosome Start Stop Links
2 98600752 98600793 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 98604108 98604191 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 98608307 98608405 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (225 nt):
ATGCCTAAGTATTATGAGGACAAGCCGCAGGGCGGCGCGTGCGCGGGCCTGAAGGAGGACCTGGGCGCGT
GTCTGCTGCAGTCGGACTGTGTGGTCCAGGAAGGAAAATCACCTCGGCAGTGTTTGAAGGAAGGATACTG
CAACTCTTTGAAGTACGCATTTTTTGAGTGTAAAAGATCAGTGTTGGATAACAGGGCAAGATTCAGAGGA
AGAAAAGGATATTGA

Translation (74 aa):
MPKYYEDKPQGGACAGLKEDLGACLLQSDCVVQEGKSPRQCLKEGYCNSLKYAFFECKRSVLDNRARFRG
RKGY


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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