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Report for CCDS13584.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
13584.1 Public Homo sapiens 21 MAP3K7CL 24 110 108 CCDS HistoryNCBI Gene:56911Re-query CCDS DB by CCDS ID:13584.1Re-query CCDS DB by GeneID:56911See the combined annotation on chromosome 21 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 13584.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000286791.9 ENSP00000286791.6 Accepted alive Link to Ensembl Transcript Viewer:ENST00000286791.9Link to Ensembl Protein Viewer:ENSP00000286791.6Re-query CCDS DB by Nucleotide ID:ENST00000286791Re-query CCDS DB by Protein ID:ENSP00000286791
Original member Current member EBI ENST00000341618.8 ENSP00000343212.4 Accepted alive Link to Ensembl Transcript Viewer:ENST00000341618.8Link to Ensembl Protein Viewer:ENSP00000343212.4Re-query CCDS DB by Nucleotide ID:ENST00000341618Re-query CCDS DB by Protein ID:ENSP00000343212
Original member Current member EBI ENST00000399947.6 ENSP00000382828.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000399947.6Link to Ensembl Protein Viewer:ENSP00000382828.2Re-query CCDS DB by Nucleotide ID:ENST00000399947Re-query CCDS DB by Protein ID:ENSP00000382828
Original member Current member NCBI NM_001286634.2 NP_001273563.1 Accepted alive Link to Nucleotide Sequence:NM_001286634.2Link to Protein Sequence:NP_001273563.1Re-query CCDS DB by Nucleotide ID:NM_001286634Re-query CCDS DB by Protein ID:NP_001273563Link to BLAST:NP_001273563.1
Original member Current member NCBI NM_001371369.1 NP_001358298.1 Accepted alive Link to Nucleotide Sequence:NM_001371369.1Link to Protein Sequence:NP_001358298.1Re-query CCDS DB by Nucleotide ID:NM_001371369Re-query CCDS DB by Protein ID:NP_001358298Link to BLAST:NP_001358298.1
Original member Current member NCBI NM_020152.4 NP_064537.1 Accepted alive Link to Nucleotide Sequence:NM_020152.4Link to Protein Sequence:NP_064537.1Re-query CCDS DB by Nucleotide ID:NM_020152Re-query CCDS DB by Protein ID:NP_064537Link to BLAST:NP_064537.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001273563.1 242 P57077-1 242 100% 0 0
NP_001358298.1 242 P57077-1 242 100% 0 0
NP_064537.1 242 P57077-1 242 100% 0 0

Chromosomal Locations for CCDS 13584.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 21 (NC_000021.9)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 21Link to Ensembl Genome Browser on chromosome 21See the combined annotation on chromosome 21 in Sequence Viewer

Chromosome Start Stop Links
21 29085861 29085917 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 21Link to Ensembl Genome Browser on chromosome 21
21 29091501 29091576 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 21Link to Ensembl Genome Browser on chromosome 21
21 29091668 29091761 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 21Link to Ensembl Genome Browser on chromosome 21
21 29092439 29092581 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 21Link to Ensembl Genome Browser on chromosome 21
21 29149189 29149250 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 21Link to Ensembl Genome Browser on chromosome 21
21 29159941 29160056 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 21Link to Ensembl Genome Browser on chromosome 21
21 29174712 29174892 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 21Link to Ensembl Genome Browser on chromosome 21

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (729 nt):
ATGGTTCAGCTGATTGCACCTTTAGAAGTTATGTGGAACGAGGCAGCAGATCTTAAGCCCCTTGCTCTGT
CACGCAGGCTGGAATGCAGTGGTGGAATCATGGCTCACTACAGCCCTGACCTCCTGGGCCCAGAGATGGA
GTCTCGCTATTTTGCCCAGGTTGGTCTTGAACACCTGGCTTCAAGCAGTCCTCCTGCTTTTGGCTTCTTG
AAGTGCTTGGATTACAGTATTTCAGTTTTATGCTCTGCAACAAGTTTGGCCATGTTGGAGGACAATCCAA
AGGTCAGCAAGTTGGCTACTGGCGATTGGATGCTCACTCTGAAGCCAAAGTCTATTACTGTGCCCGTGGA
AATCCCCAGCTCCCCTCTGGATGATACACCCCCTGAAGACTCCATTCCTTTGGTCTTTCCAGAATTAGAC
CAGCAGCTACAGCCCCTGCCGCCTTGTCATGACTCCGAGGAATCCATGGAGGTGTTCAAACAGCACTGCC
AAATAGCAGAAGAATACCATGAGGTCAAAAAGGAAATCACCCTGCTTGAGCAAAGGAAGAAGGAGCTCAT
TGCCAAGTTAGATCAGGCAGAAAAGGAGAAGGTGGATGCTGCTGAGCTGGTTCGGGAATTCGAGGCTCTG
ACGGAGGAGAATCGGACGTTGAGGTTGGCCCAGTCTCAATGTGTGGAACAACTGGAGAAACTTCGAATAC
AGTATCAGAAGAGGCAGGGCTCGTCCTAA

Translation (242 aa):
MVQLIAPLEVMWNEAADLKPLALSRRLECSGGIMAHYSPDLLGPEMESRYFAQVGLEHLASSSPPAFGFL
KCLDYSISVLCSATSLAMLEDNPKVSKLATGDWMLTLKPKSITVPVEIPSSPLDDTPPEDSIPLVFPELD
QQLQPLPPCHDSEESMEVFKQHCQIAEEYHEVKKEITLLEQRKKELIAKLDQAEKEKVDAAELVREFEAL
TEENRTLRLAQSQCVEQLEKLRIQYQKRQGSS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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