NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq


Report for CCDS32330.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
32330.1 Public Homo sapiens 15 ZNF774 24 110 108 CCDS HistoryNCBI Gene:342132Re-query CCDS DB by CCDS ID:32330.1Re-query CCDS DB by GeneID:342132See the combined annotation on chromosome 15 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 32330.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000354377.8 ENSP00000346348.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000354377.8Link to Ensembl Protein Viewer:ENSP00000346348.3Re-query CCDS DB by Nucleotide ID:ENST00000354377Re-query CCDS DB by Protein ID:ENSP00000346348
Original member Current member NCBI NM_001004309.3 NP_001004309.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001004309.3Link to Protein Sequence:NP_001004309.2Re-query CCDS DB by Nucleotide ID:NM_001004309Re-query CCDS DB by Protein ID:NP_001004309Link to BLAST:NP_001004309.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001004309.2 483 Q6NX45 483 100% 0 0

Chromosomal Locations for CCDS 32330.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 15 (NC_000015.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15See the combined annotation on chromosome 15 in Sequence Viewer

Chromosome Start Stop Links
15 90354661 90354764 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 90358851 90358957 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 90360043 90361283 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1452 nt):
ATGTGGCTGGGGACTTCAGGGAAGAGTGGGTTACCTGGACACTGCTTAGAGAATCCTCTCCAGGAATGCC
ACCCAGCACAGTTAGAAGAATGGGCTCTCAAAGGAATTTCCAGGCCTAGTGTAATCTCCCAGCCGGAGCA
GAAAGAAGAGCCATGGGTCCTACCACTCCAAAACTTTGAGGCGAGGAAGATCCCGAGGGAAAGCCACACA
GACTGTGAGCATCAGGTGGCAAAGCTCAATCAGGACAATTCTGAAACAGCAGAACAATGTGGAACATCCT
CAGAAAGGACCAATAAAGATCTTTCTCATACTCTTAGTTGGGGAGGAAACTGGGAGCAAGGCCTAGAATT
AGAAGGGCAACATGGAACCCTTCCAGGAGAGGGCCAGCTGGAGTCCTTTTCACAGGAGAGGGATTTAAAC
AAGCTCCTGGATGGATATGTAGGAGAGAAGCCTATGTGTGCAGAATGCGGGAAAAGCTTTAACCAGAGTT
CCTATCTCATAAGACACCTAAGAACCCACACTGGCGAGAGGCCCTATACGTGCATTGAGTGTGGGAAAGG
CTTCAAACAGAGCTCAGACCTTGTCACCCATCGCAGAACACACACAGGAGAGAAGCCCTACCAATGCAAG
GGGTGTGAGAAGAAATTCAGCGACAGCTCAACACTCATCAAACATCAGAGAACCCACACAGGGGAGAGAC
CCTATGAGTGCCCAGAGTGTGGAAAGACTTTTGGGCGGAAGCCACACCTCATAATGCACCAAAGAACCCA
CACAGGCGAGAAGCCCTACGCGTGCCTGGAATGTCACAAAAGCTTCAGTCGAAGCTCAAATTTCATCACT
CACCAGAGGACCCACACAGGGGTGAAGCCTTACAGGTGTAATGACTGTGGGGAGAGTTTTAGCCAGAGCT
CGGATTTGATTAAGCACCAACGAACCCACACGGGAGAACGGCCCTTCAAATGCCCGGAGTGCGGGAAGGG
CTTCAGAGATAGTTCTCATTTTGTAGCTCACATGAGCACTCATTCAGGAGAGAGGCCTTTCAGTTGTCCT
GACTGCCACAAAAGCTTCAGTCAGAGCTCACATTTGGTCACGCACCAAAGAACACACACAGGTGAGAGAC
CTTTTAAGTGCGAAAACTGTGGGAAAGGATTCGCCGACAGCTCCGCCCTCATTAAGCACCAACGAATCCA
CACCGGAGAAAGACCCTACAAATGTGGAGAGTGTGGGAAGAGCTTCAATCAGAGCTCCCACTTTATTACC
CATCAGCGAATCCACTTAGGAGACAGGCCCTATCGATGTCCTGAGTGTGGCAAGACCTTCAATCAGCGTT
CCCATTTCCTCACACACCAGAGAACGCATACAGGAGAAAAACCTTTCCACTGTAGTAAATGTAACAAGAG
CTTCCGTCAGAAAGCGCATCTTTTATGCCATCAAAACACCCATTTGATTTAG

Translation (483 aa):
MWLGTSGKSGLPGHCLENPLQECHPAQLEEWALKGISRPSVISQPEQKEEPWVLPLQNFEARKIPRESHT
DCEHQVAKLNQDNSETAEQCGTSSERTNKDLSHTLSWGGNWEQGLELEGQHGTLPGEGQLESFSQERDLN
KLLDGYVGEKPMCAECGKSFNQSSYLIRHLRTHTGERPYTCIECGKGFKQSSDLVTHRRTHTGEKPYQCK
GCEKKFSDSSTLIKHQRTHTGERPYECPECGKTFGRKPHLIMHQRTHTGEKPYACLECHKSFSRSSNFIT
HQRTHTGVKPYRCNDCGESFSQSSDLIKHQRTHTGERPFKCPECGKGFRDSSHFVAHMSTHSGERPFSCP
DCHKSFSQSSHLVTHQRTHTGERPFKCENCGKGFADSSALIKHQRIHTGERPYKCGECGKSFNQSSHFIT
HQRIHLGDRPYRCPECGKTFNQRSHFLTHQRTHTGEKPFHCSKCNKSFRQKAHLLCHQNTHLI


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH